Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.11■□□□□ 0.49
CLDN1O95832 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN1O95832 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN1O95832 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN1O95832 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.11■□□□□ 0.49
CLDN1O95832 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN1O95832 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.11■□□□□ 0.49
CLDN1O95832 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.11■□□□□ 0.49
CLDN1O95832 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN1O95832 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN1O95832 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CLDN1O95832 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CLDN1O95832 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN1O95832 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN1O95832 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN1O95832 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN1O95832 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN1O95832 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN1O95832 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CLDN1O95832 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.1■□□□□ 0.49
CLDN1O95832 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.1■□□□□ 0.49
CLDN1O95832 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.1■□□□□ 0.49
CLDN1O95832 MIR6786-201ENST00000616843 113 ntBASIC18.1■□□□□ 0.49
CLDN1O95832 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.1■□□□□ 0.49
CLDN1O95832 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN1O95832 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CLDN1O95832 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN1O95832 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN1O95832 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN1O95832 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN1O95832 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN1O95832 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN1O95832 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.09■□□□□ 0.49
CLDN1O95832 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CLDN1O95832 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN1O95832 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN1O95832 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.09■□□□□ 0.49
CLDN1O95832 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN1O95832 AC005521.1-201ENST00000393351 872 ntBASIC18.09■□□□□ 0.49
CLDN1O95832 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.09■□□□□ 0.49
CLDN1O95832 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.09■□□□□ 0.49
CLDN1O95832 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.09■□□□□ 0.49
CLDN1O95832 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN1O95832 AC120498.8-201ENST00000614275 531 ntBASIC18.09■□□□□ 0.49
CLDN1O95832 AC005363.2-201ENST00000618631 242 ntBASIC18.09■□□□□ 0.49
CLDN1O95832 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CLDN1O95832 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN1O95832 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.09■□□□□ 0.49
CLDN1O95832 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CLDN1O95832 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN1O95832 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN1O95832 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.08■□□□□ 0.49
CLDN1O95832 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLDN1O95832 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLDN1O95832 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLDN1O95832 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLDN1O95832 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.49
CLDN1O95832 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CLDN1O95832 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLDN1O95832 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN1O95832 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN1O95832 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.08■□□□□ 0.48
CLDN1O95832 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.08■□□□□ 0.48
CLDN1O95832 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN1O95832 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN1O95832 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.08■□□□□ 0.48
CLDN1O95832 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CLDN1O95832 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN1O95832 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN1O95832 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
CLDN1O95832 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN1O95832 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN1O95832 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN1O95832 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
CLDN1O95832 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN1O95832 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CLDN1O95832 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.07■□□□□ 0.48
CLDN1O95832 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.07■□□□□ 0.48
CLDN1O95832 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CLDN1O95832 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CLDN1O95832 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.07■□□□□ 0.48
CLDN1O95832 AC145285.6-201ENST00000604632 637 ntBASIC18.07■□□□□ 0.48
CLDN1O95832 AC105020.6-201ENST00000621523 1217 ntBASIC18.07■□□□□ 0.48
CLDN1O95832 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.07■□□□□ 0.48
CLDN1O95832 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN1O95832 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN1O95832 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.07■□□□□ 0.48
CLDN1O95832 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.07■□□□□ 0.48
CLDN1O95832 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN1O95832 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN1O95832 AC092053.2-201ENST00000640557 1818 ntBASIC18.07■□□□□ 0.48
CLDN1O95832 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN1O95832 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN1O95832 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.07■□□□□ 0.48
CLDN1O95832 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN1O95832 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.06■□□□□ 0.48
CLDN1O95832 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN1O95832 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.06■□□□□ 0.48
CLDN1O95832 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN1O95832 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms