Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 CDV3P1-201ENST00000471403 739 ntBASIC20.48■□□□□ 0.87
USP1O94782 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
USP1O94782 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.48■□□□□ 0.87
USP1O94782 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
USP1O94782 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
USP1O94782 NTF6G-201ENST00000591094 616 ntBASIC20.48■□□□□ 0.87
USP1O94782 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.48■□□□□ 0.87
USP1O94782 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
USP1O94782 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
USP1O94782 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
USP1O94782 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.47■□□□□ 0.87
USP1O94782 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP1O94782 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP1O94782 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP1O94782 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.47■□□□□ 0.87
USP1O94782 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.47■□□□□ 0.87
USP1O94782 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
USP1O94782 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.47■□□□□ 0.87
USP1O94782 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.47■□□□□ 0.87
USP1O94782 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP1O94782 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP1O94782 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP1O94782 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP1O94782 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
USP1O94782 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
USP1O94782 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP1O94782 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP1O94782 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
USP1O94782 AC112907.3-201ENST00000577781 2400 ntBASIC20.46■□□□□ 0.87
USP1O94782 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.46■□□□□ 0.87
USP1O94782 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP1O94782 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP1O94782 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP1O94782 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP1O94782 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP1O94782 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.46■□□□□ 0.87
USP1O94782 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
USP1O94782 FAM21FP-204ENST00000608637 956 ntBASIC20.46■□□□□ 0.87
USP1O94782 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
USP1O94782 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP1O94782 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
USP1O94782 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.46■□□□□ 0.87
USP1O94782 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
USP1O94782 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.46■□□□□ 0.87
USP1O94782 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
USP1O94782 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
USP1O94782 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
USP1O94782 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
USP1O94782 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
USP1O94782 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
USP1O94782 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
USP1O94782 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.45■□□□□ 0.87
USP1O94782 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.45■□□□□ 0.86
USP1O94782 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
USP1O94782 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.45■□□□□ 0.86
USP1O94782 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
USP1O94782 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
USP1O94782 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
USP1O94782 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
USP1O94782 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.45■□□□□ 0.86
USP1O94782 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
USP1O94782 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.45■□□□□ 0.86
USP1O94782 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.45■□□□□ 0.86
USP1O94782 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.45■□□□□ 0.86
USP1O94782 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP1O94782 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP1O94782 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP1O94782 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP1O94782 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.45■□□□□ 0.86
USP1O94782 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.45■□□□□ 0.86
USP1O94782 PCDHAC2-203ENST00000615316 3011 ntBASIC20.45■□□□□ 0.86
USP1O94782 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
USP1O94782 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.44■□□□□ 0.86
USP1O94782 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
USP1O94782 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.44■□□□□ 0.86
USP1O94782 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.44■□□□□ 0.86
USP1O94782 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
USP1O94782 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.44■□□□□ 0.86
USP1O94782 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
USP1O94782 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP1O94782 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.44■□□□□ 0.86
USP1O94782 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.44■□□□□ 0.86
USP1O94782 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.44■□□□□ 0.86
USP1O94782 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
USP1O94782 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.44■□□□□ 0.86
USP1O94782 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
USP1O94782 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
USP1O94782 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP1O94782 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP1O94782 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP1O94782 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP1O94782 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.44■□□□□ 0.86
USP1O94782 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.44■□□□□ 0.86
USP1O94782 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP1O94782 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.43■□□□□ 0.86
USP1O94782 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
USP1O94782 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
USP1O94782 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP1O94782 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
USP1O94782 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms