Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SNRNP200O75643 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SNRNP200O75643 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SNRNP200O75643 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.44■□□□□ 0.7
SNRNP200O75643 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SNRNP200O75643 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.44■□□□□ 0.7
SNRNP200O75643 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.44■□□□□ 0.7
SNRNP200O75643 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNRNP200O75643 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNRNP200O75643 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNRNP200O75643 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNRNP200O75643 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.43■□□□□ 0.7
SNRNP200O75643 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.43■□□□□ 0.7
SNRNP200O75643 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNRNP200O75643 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.43■□□□□ 0.7
SNRNP200O75643 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNRNP200O75643 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
SNRNP200O75643 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNRNP200O75643 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SNRNP200O75643 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.43■□□□□ 0.7
SNRNP200O75643 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNRNP200O75643 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNRNP200O75643 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.43■□□□□ 0.7
SNRNP200O75643 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.43■□□□□ 0.7
SNRNP200O75643 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNRNP200O75643 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SNRNP200O75643 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.43■□□□□ 0.7
SNRNP200O75643 POU5F1P3-201ENST00000428824 1078 ntBASIC19.43■□□□□ 0.7
SNRNP200O75643 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.43■□□□□ 0.7
SNRNP200O75643 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.43■□□□□ 0.7
SNRNP200O75643 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.43■□□□□ 0.7
SNRNP200O75643 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNRNP200O75643 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SNRNP200O75643 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNRNP200O75643 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNRNP200O75643 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNRNP200O75643 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.42■□□□□ 0.7
SNRNP200O75643 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNRNP200O75643 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNRNP200O75643 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNRNP200O75643 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNRNP200O75643 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNRNP200O75643 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.42■□□□□ 0.7
SNRNP200O75643 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.42■□□□□ 0.7
SNRNP200O75643 AC092368.3-202ENST00000574180 1591 ntBASIC19.42■□□□□ 0.7
SNRNP200O75643 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SNRNP200O75643 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.42■□□□□ 0.7
SNRNP200O75643 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNRNP200O75643 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNRNP200O75643 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNRNP200O75643 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.42■□□□□ 0.7
SNRNP200O75643 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SNRNP200O75643 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.42■□□□□ 0.7
SNRNP200O75643 AC069544.1-201ENST00000609399 999 ntBASIC19.42■□□□□ 0.7
SNRNP200O75643 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.42■□□□□ 0.7
SNRNP200O75643 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SNRNP200O75643 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNRNP200O75643 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
SNRNP200O75643 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNRNP200O75643 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNRNP200O75643 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNRNP200O75643 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNRNP200O75643 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNRNP200O75643 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNRNP200O75643 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNRNP200O75643 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.41■□□□□ 0.7
SNRNP200O75643 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNRNP200O75643 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SNRNP200O75643 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SNRNP200O75643 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNRNP200O75643 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNRNP200O75643 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SNRNP200O75643 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.41■□□□□ 0.7
SNRNP200O75643 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNRNP200O75643 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNRNP200O75643 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNRNP200O75643 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNRNP200O75643 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.41■□□□□ 0.7
SNRNP200O75643 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.41■□□□□ 0.7
SNRNP200O75643 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNRNP200O75643 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.4■□□□□ 0.7
SNRNP200O75643 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.4■□□□□ 0.7
SNRNP200O75643 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNRNP200O75643 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.4■□□□□ 0.7
SNRNP200O75643 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.4■□□□□ 0.7
SNRNP200O75643 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNRNP200O75643 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.4■□□□□ 0.7
SNRNP200O75643 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNRNP200O75643 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNRNP200O75643 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.4■□□□□ 0.7
SNRNP200O75643 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNRNP200O75643 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNRNP200O75643 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SNRNP200O75643 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNRNP200O75643 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNRNP200O75643 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNRNP200O75643 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNRNP200O75643 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.4■□□□□ 0.7
SNRNP200O75643 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.4■□□□□ 0.7
SNRNP200O75643 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms