Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.2■□□□□ 0.82
NDUFS3O75489 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NDUFS3O75489 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NDUFS3O75489 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NDUFS3O75489 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.2■□□□□ 0.82
NDUFS3O75489 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NDUFS3O75489 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NDUFS3O75489 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NDUFS3O75489 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.2■□□□□ 0.82
NDUFS3O75489 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
NDUFS3O75489 AC069236.1-201ENST00000604339 616 ntBASIC20.2■□□□□ 0.82
NDUFS3O75489 IKBKGP1-201ENST00000612193 1073 ntBASIC20.2■□□□□ 0.82
NDUFS3O75489 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.2■□□□□ 0.82
NDUFS3O75489 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.2■□□□□ 0.82
NDUFS3O75489 AC008694.1-202ENST00000636953 945 ntBASIC20.2■□□□□ 0.82
NDUFS3O75489 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NDUFS3O75489 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NDUFS3O75489 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NDUFS3O75489 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.2■□□□□ 0.82
NDUFS3O75489 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NDUFS3O75489 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.2■□□□□ 0.82
NDUFS3O75489 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NDUFS3O75489 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NDUFS3O75489 AC087633.2-202ENST00000565166 1439 ntBASIC20.19■□□□□ 0.82
NDUFS3O75489 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
NDUFS3O75489 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
NDUFS3O75489 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NDUFS3O75489 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.19■□□□□ 0.82
NDUFS3O75489 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NDUFS3O75489 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.19■□□□□ 0.82
NDUFS3O75489 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
NDUFS3O75489 AL137784.2-201ENST00000607332 1000 ntBASIC20.19■□□□□ 0.82
NDUFS3O75489 AL356652.1-201ENST00000615962 565 ntBASIC20.19■□□□□ 0.82
NDUFS3O75489 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
NDUFS3O75489 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.19■□□□□ 0.82
NDUFS3O75489 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NDUFS3O75489 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NDUFS3O75489 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.19■□□□□ 0.82
NDUFS3O75489 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NDUFS3O75489 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NDUFS3O75489 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NDUFS3O75489 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
NDUFS3O75489 AL512408.1-201ENST00000569378 2000 ntBASIC20.19■□□□□ 0.82
NDUFS3O75489 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.18■□□□□ 0.82
NDUFS3O75489 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
NDUFS3O75489 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.18■□□□□ 0.82
NDUFS3O75489 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NDUFS3O75489 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NDUFS3O75489 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NDUFS3O75489 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NDUFS3O75489 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NDUFS3O75489 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.18■□□□□ 0.82
NDUFS3O75489 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NDUFS3O75489 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NDUFS3O75489 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NDUFS3O75489 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.18■□□□□ 0.82
NDUFS3O75489 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NDUFS3O75489 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.18■□□□□ 0.82
NDUFS3O75489 CYP2T1P-201ENST00000432607 1285 ntBASIC20.18■□□□□ 0.82
NDUFS3O75489 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.18■□□□□ 0.82
NDUFS3O75489 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NDUFS3O75489 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.18■□□□□ 0.82
NDUFS3O75489 AC092437.1-201ENST00000624794 1048 ntBASIC20.18■□□□□ 0.82
NDUFS3O75489 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NDUFS3O75489 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NDUFS3O75489 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NDUFS3O75489 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
NDUFS3O75489 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.18■□□□□ 0.82
NDUFS3O75489 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NDUFS3O75489 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NDUFS3O75489 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NDUFS3O75489 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NDUFS3O75489 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NDUFS3O75489 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NDUFS3O75489 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
NDUFS3O75489 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NDUFS3O75489 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NDUFS3O75489 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.17■□□□□ 0.82
NDUFS3O75489 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
NDUFS3O75489 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
NDUFS3O75489 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NDUFS3O75489 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
NDUFS3O75489 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.17■□□□□ 0.82
NDUFS3O75489 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
NDUFS3O75489 AC004911.1-201ENST00000416316 871 ntBASIC20.17■□□□□ 0.82
NDUFS3O75489 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.17■□□□□ 0.82
NDUFS3O75489 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.17■□□□□ 0.82
NDUFS3O75489 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NDUFS3O75489 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NDUFS3O75489 AC080038.1-201ENST00000611274 1154 ntBASIC20.17■□□□□ 0.82
NDUFS3O75489 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NDUFS3O75489 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NDUFS3O75489 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NDUFS3O75489 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
NDUFS3O75489 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NDUFS3O75489 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
NDUFS3O75489 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NDUFS3O75489 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NDUFS3O75489 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
NDUFS3O75489 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms