Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
CCNT1O60563 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCNT1O60563 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC23.05■■□□□ 1.28
CCNT1O60563 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC23.05■■□□□ 1.28
CCNT1O60563 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC23.05■■□□□ 1.28
CCNT1O60563 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
CCNT1O60563 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CCNT1O60563 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCNT1O60563 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCNT1O60563 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC23.05■■□□□ 1.28
CCNT1O60563 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCNT1O60563 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC23.05■■□□□ 1.28
CCNT1O60563 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCNT1O60563 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCNT1O60563 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCNT1O60563 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCNT1O60563 AL355802.2-201ENST00000402069 882 ntBASIC23.04■■□□□ 1.28
CCNT1O60563 SERPINH1P1-201ENST00000419794 1249 ntBASIC23.04■■□□□ 1.28
CCNT1O60563 OR2A1-AS1-201ENST00000462305 773 ntBASIC23.04■■□□□ 1.28
CCNT1O60563 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC23.04■■□□□ 1.28
CCNT1O60563 MIR4758-201ENST00000577688 71 ntBASIC23.04■■□□□ 1.28
CCNT1O60563 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC23.04■■□□□ 1.28
CCNT1O60563 AC092118.2-201ENST00000613495 667 ntBASIC23.04■■□□□ 1.28
CCNT1O60563 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCNT1O60563 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CCNT1O60563 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC23.04■■□□□ 1.28
CCNT1O60563 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CCNT1O60563 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC23.04■■□□□ 1.28
CCNT1O60563 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCNT1O60563 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC23.04■■□□□ 1.28
CCNT1O60563 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCNT1O60563 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
CCNT1O60563 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCNT1O60563 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCNT1O60563 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCNT1O60563 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
CCNT1O60563 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC23.03■■□□□ 1.28
CCNT1O60563 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC23.03■■□□□ 1.28
CCNT1O60563 AC098934.4-201ENST00000564127 592 ntBASIC23.03■■□□□ 1.28
CCNT1O60563 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC23.03■■□□□ 1.28
CCNT1O60563 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC23.03■■□□□ 1.28
CCNT1O60563 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
CCNT1O60563 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCNT1O60563 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
CCNT1O60563 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCNT1O60563 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCNT1O60563 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CCNT1O60563 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCNT1O60563 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC23.03■■□□□ 1.28
CCNT1O60563 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCNT1O60563 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC23.02■■□□□ 1.28
CCNT1O60563 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CCNT1O60563 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC23.02■■□□□ 1.28
CCNT1O60563 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
CCNT1O60563 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
CCNT1O60563 PPP1R14BP2-201ENST00000426284 444 ntBASIC23.02■■□□□ 1.28
CCNT1O60563 DUSP5P2-201ENST00000426873 1033 ntBASIC23.02■■□□□ 1.28
CCNT1O60563 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC23.02■■□□□ 1.28
CCNT1O60563 AC142086.2-201ENST00000569753 217 ntBASIC23.02■■□□□ 1.28
CCNT1O60563 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCNT1O60563 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
CCNT1O60563 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CCNT1O60563 GABARAPL3-202ENST00000624044 1851 ntBASIC23.02■■□□□ 1.28
CCNT1O60563 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC23.02■■□□□ 1.28
CCNT1O60563 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC23.02■■□□□ 1.28
CCNT1O60563 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCNT1O60563 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CCNT1O60563 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCNT1O60563 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCNT1O60563 DET1-207ENST00000564406 2315 ntTSL 2 BASIC23.01■■□□□ 1.27
CCNT1O60563 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCNT1O60563 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
CCNT1O60563 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCNT1O60563 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC23.01■■□□□ 1.27
CCNT1O60563 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC23.01■■□□□ 1.27
CCNT1O60563 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC23.01■■□□□ 1.27
CCNT1O60563 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC23.01■■□□□ 1.27
CCNT1O60563 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CCNT1O60563 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCNT1O60563 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC23.01■■□□□ 1.27
CCNT1O60563 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC23.01■■□□□ 1.27
CCNT1O60563 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC23.01■■□□□ 1.27
CCNT1O60563 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC23.01■■□□□ 1.27
CCNT1O60563 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCNT1O60563 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
CCNT1O60563 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
CCNT1O60563 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CCNT1O60563 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CCNT1O60563 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC23■■□□□ 1.27
CCNT1O60563 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC23■■□□□ 1.27
CCNT1O60563 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CCNT1O60563 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
CCNT1O60563 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
CCNT1O60563 HES2-205ENST00000487437 968 ntTSL 3 BASIC23■■□□□ 1.27
CCNT1O60563 C2orf69P4-201ENST00000565394 541 ntBASIC23■■□□□ 1.27
CCNT1O60563 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC23■■□□□ 1.27
CCNT1O60563 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC23■■□□□ 1.27
CCNT1O60563 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC23■■□□□ 1.27
CCNT1O60563 NXN-202ENST00000537628 1340 ntTSL 3 BASIC23■■□□□ 1.27
CCNT1O60563 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms