Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZIC3O60481 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ZIC3O60481 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZIC3O60481 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.27■□□□□ 0.52
ZIC3O60481 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
ZIC3O60481 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZIC3O60481 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZIC3O60481 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.27■□□□□ 0.52
ZIC3O60481 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ZIC3O60481 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ZIC3O60481 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
ZIC3O60481 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ZIC3O60481 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.26■□□□□ 0.51
ZIC3O60481 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.26■□□□□ 0.51
ZIC3O60481 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ZIC3O60481 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.26■□□□□ 0.51
ZIC3O60481 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.26■□□□□ 0.51
ZIC3O60481 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.26■□□□□ 0.51
ZIC3O60481 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZIC3O60481 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
ZIC3O60481 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZIC3O60481 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZIC3O60481 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
ZIC3O60481 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZIC3O60481 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.26■□□□□ 0.51
ZIC3O60481 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.26■□□□□ 0.51
ZIC3O60481 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.26■□□□□ 0.51
ZIC3O60481 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
ZIC3O60481 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.26■□□□□ 0.51
ZIC3O60481 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.26■□□□□ 0.51
ZIC3O60481 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
ZIC3O60481 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZIC3O60481 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZIC3O60481 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.26■□□□□ 0.51
ZIC3O60481 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.26■□□□□ 0.51
ZIC3O60481 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.26■□□□□ 0.51
ZIC3O60481 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.26■□□□□ 0.51
ZIC3O60481 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.26■□□□□ 0.51
ZIC3O60481 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ZIC3O60481 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZIC3O60481 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ZIC3O60481 ABHD17AP1-201ENST00000358206 933 ntBASIC18.25■□□□□ 0.51
ZIC3O60481 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.25■□□□□ 0.51
ZIC3O60481 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.25■□□□□ 0.51
ZIC3O60481 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.25■□□□□ 0.51
ZIC3O60481 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.25■□□□□ 0.51
ZIC3O60481 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZIC3O60481 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.25■□□□□ 0.51
ZIC3O60481 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.25■□□□□ 0.51
ZIC3O60481 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ZIC3O60481 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.25■□□□□ 0.51
ZIC3O60481 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.25■□□□□ 0.51
ZIC3O60481 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.25■□□□□ 0.51
ZIC3O60481 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ZIC3O60481 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
ZIC3O60481 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ZIC3O60481 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.25■□□□□ 0.51
ZIC3O60481 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZIC3O60481 AC092720.2-201ENST00000602388 1665 ntBASIC18.25■□□□□ 0.51
ZIC3O60481 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.25■□□□□ 0.51
ZIC3O60481 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.25■□□□□ 0.51
ZIC3O60481 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.24■□□□□ 0.51
ZIC3O60481 PTBP1P-201ENST00000554374 1601 ntBASIC18.24■□□□□ 0.51
ZIC3O60481 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.24■□□□□ 0.51
ZIC3O60481 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZIC3O60481 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
ZIC3O60481 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ZIC3O60481 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZIC3O60481 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.24■□□□□ 0.51
ZIC3O60481 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.24■□□□□ 0.51
ZIC3O60481 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.24■□□□□ 0.51
ZIC3O60481 AC005829.2-201ENST00000571422 1056 ntBASIC18.24■□□□□ 0.51
ZIC3O60481 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ZIC3O60481 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ZIC3O60481 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
ZIC3O60481 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZIC3O60481 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ZIC3O60481 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZIC3O60481 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ZIC3O60481 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ZIC3O60481 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ZIC3O60481 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.23■□□□□ 0.51
ZIC3O60481 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.23■□□□□ 0.51
ZIC3O60481 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZIC3O60481 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
ZIC3O60481 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZIC3O60481 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
ZIC3O60481 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.23■□□□□ 0.51
ZIC3O60481 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ZIC3O60481 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZIC3O60481 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZIC3O60481 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.23■□□□□ 0.51
ZIC3O60481 ESRRAP1-201ENST00000400596 1257 ntBASIC18.23■□□□□ 0.51
ZIC3O60481 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.23■□□□□ 0.51
ZIC3O60481 POU5F1P3-201ENST00000428824 1078 ntBASIC18.23■□□□□ 0.51
ZIC3O60481 UNC93B4-201ENST00000505679 747 ntBASIC18.23■□□□□ 0.51
ZIC3O60481 AC008403.3-201ENST00000598924 454 ntBASIC18.23■□□□□ 0.51
ZIC3O60481 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZIC3O60481 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZIC3O60481 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms