Protein–RNA interactions for Protein: O60383

GDF9, Growth/differentiation factor 9, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9O60383 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
GDF9O60383 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.86■□□□□ 0.77
GDF9O60383 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
GDF9O60383 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.86■□□□□ 0.77
GDF9O60383 AC124283.5-201ENST00000624661 1809 ntBASIC19.86■□□□□ 0.77
GDF9O60383 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.85■□□□□ 0.77
GDF9O60383 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.85■□□□□ 0.77
GDF9O60383 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.85■□□□□ 0.77
GDF9O60383 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.85■□□□□ 0.77
GDF9O60383 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.85■□□□□ 0.77
GDF9O60383 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
GDF9O60383 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.85■□□□□ 0.77
GDF9O60383 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
GDF9O60383 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.85■□□□□ 0.77
GDF9O60383 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.85■□□□□ 0.77
GDF9O60383 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
GDF9O60383 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
GDF9O60383 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GDF9O60383 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GDF9O60383 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GDF9O60383 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.85■□□□□ 0.77
GDF9O60383 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.85■□□□□ 0.77
GDF9O60383 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.85■□□□□ 0.77
GDF9O60383 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
GDF9O60383 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
GDF9O60383 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GDF9O60383 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GDF9O60383 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.84■□□□□ 0.77
GDF9O60383 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.84■□□□□ 0.77
GDF9O60383 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.84■□□□□ 0.77
GDF9O60383 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
GDF9O60383 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.84■□□□□ 0.77
GDF9O60383 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.84■□□□□ 0.77
GDF9O60383 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.84■□□□□ 0.77
GDF9O60383 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.84■□□□□ 0.77
GDF9O60383 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.84■□□□□ 0.77
GDF9O60383 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GDF9O60383 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
GDF9O60383 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.84■□□□□ 0.77
GDF9O60383 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
GDF9O60383 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.84■□□□□ 0.77
GDF9O60383 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
GDF9O60383 AC127496.7-201ENST00000625110 1798 ntBASIC19.83■□□□□ 0.77
GDF9O60383 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
GDF9O60383 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
GDF9O60383 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
GDF9O60383 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
GDF9O60383 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
GDF9O60383 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.83■□□□□ 0.77
GDF9O60383 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
GDF9O60383 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
GDF9O60383 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.83■□□□□ 0.77
GDF9O60383 AP002982.1-201ENST00000492365 877 ntBASIC19.83■□□□□ 0.77
GDF9O60383 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.83■□□□□ 0.77
GDF9O60383 KRT126P-201ENST00000549467 1181 ntBASIC19.83■□□□□ 0.77
GDF9O60383 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.83■□□□□ 0.77
GDF9O60383 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.83■□□□□ 0.77
GDF9O60383 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
GDF9O60383 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
GDF9O60383 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
GDF9O60383 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
GDF9O60383 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
GDF9O60383 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
GDF9O60383 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
GDF9O60383 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GDF9O60383 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GDF9O60383 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GDF9O60383 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.82■□□□□ 0.76
GDF9O60383 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GDF9O60383 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GDF9O60383 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GDF9O60383 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.82■□□□□ 0.76
GDF9O60383 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GDF9O60383 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GDF9O60383 KRT18P56-201ENST00000507275 550 ntBASIC19.82■□□□□ 0.76
GDF9O60383 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.82■□□□□ 0.76
GDF9O60383 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.82■□□□□ 0.76
GDF9O60383 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.82■□□□□ 0.76
GDF9O60383 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
GDF9O60383 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
GDF9O60383 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GDF9O60383 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GDF9O60383 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
GDF9O60383 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
GDF9O60383 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.82■□□□□ 0.76
GDF9O60383 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.82■□□□□ 0.76
GDF9O60383 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GDF9O60383 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.82■□□□□ 0.76
GDF9O60383 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GDF9O60383 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GDF9O60383 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
GDF9O60383 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GDF9O60383 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.81■□□□□ 0.76
GDF9O60383 AL356652.1-201ENST00000615962 565 ntBASIC19.81■□□□□ 0.76
GDF9O60383 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.81■□□□□ 0.76
GDF9O60383 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GDF9O60383 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
GDF9O60383 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.81■□□□□ 0.76
GDF9O60383 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GDF9O60383 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms