Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LCMT2O60294 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LCMT2O60294 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LCMT2O60294 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.42■□□□□ 0.7
LCMT2O60294 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.41■□□□□ 0.7
LCMT2O60294 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
LCMT2O60294 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
LCMT2O60294 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
LCMT2O60294 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.41■□□□□ 0.7
LCMT2O60294 AC098934.4-201ENST00000564127 592 ntBASIC19.41■□□□□ 0.7
LCMT2O60294 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.41■□□□□ 0.7
LCMT2O60294 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
LCMT2O60294 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.41■□□□□ 0.7
LCMT2O60294 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LCMT2O60294 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LCMT2O60294 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LCMT2O60294 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LCMT2O60294 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LCMT2O60294 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.41■□□□□ 0.7
LCMT2O60294 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.41■□□□□ 0.7
LCMT2O60294 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LCMT2O60294 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.4■□□□□ 0.7
LCMT2O60294 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LCMT2O60294 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LCMT2O60294 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.4■□□□□ 0.7
LCMT2O60294 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.4■□□□□ 0.7
LCMT2O60294 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.4■□□□□ 0.7
LCMT2O60294 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.4■□□□□ 0.7
LCMT2O60294 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LCMT2O60294 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LCMT2O60294 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
LCMT2O60294 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LCMT2O60294 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.4■□□□□ 0.7
LCMT2O60294 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
LCMT2O60294 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.4■□□□□ 0.7
LCMT2O60294 AC142086.2-201ENST00000569753 217 ntBASIC19.4■□□□□ 0.7
LCMT2O60294 AC092118.2-201ENST00000613495 667 ntBASIC19.4■□□□□ 0.7
LCMT2O60294 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.4■□□□□ 0.7
LCMT2O60294 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.4■□□□□ 0.7
LCMT2O60294 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LCMT2O60294 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LCMT2O60294 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
LCMT2O60294 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LCMT2O60294 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LCMT2O60294 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.4■□□□□ 0.7
LCMT2O60294 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LCMT2O60294 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.4■□□□□ 0.7
LCMT2O60294 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LCMT2O60294 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LCMT2O60294 GABARAPL3-202ENST00000624044 1851 ntBASIC19.39■□□□□ 0.7
LCMT2O60294 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
LCMT2O60294 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LCMT2O60294 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
LCMT2O60294 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LCMT2O60294 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.39■□□□□ 0.69
LCMT2O60294 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LCMT2O60294 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LCMT2O60294 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LCMT2O60294 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LCMT2O60294 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
LCMT2O60294 AL355802.2-201ENST00000402069 882 ntBASIC19.39■□□□□ 0.69
LCMT2O60294 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.39■□□□□ 0.69
LCMT2O60294 MIR4758-201ENST00000577688 71 ntBASIC19.39■□□□□ 0.69
LCMT2O60294 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.39■□□□□ 0.69
LCMT2O60294 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LCMT2O60294 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LCMT2O60294 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
LCMT2O60294 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.39■□□□□ 0.69
LCMT2O60294 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
LCMT2O60294 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.39■□□□□ 0.69
LCMT2O60294 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LCMT2O60294 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LCMT2O60294 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
LCMT2O60294 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LCMT2O60294 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
LCMT2O60294 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LCMT2O60294 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LCMT2O60294 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
LCMT2O60294 DUSP5P2-201ENST00000426873 1033 ntBASIC19.38■□□□□ 0.69
LCMT2O60294 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
LCMT2O60294 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LCMT2O60294 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
LCMT2O60294 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.38■□□□□ 0.69
LCMT2O60294 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.38■□□□□ 0.69
LCMT2O60294 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LCMT2O60294 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LCMT2O60294 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
LCMT2O60294 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
LCMT2O60294 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LCMT2O60294 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LCMT2O60294 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.37■□□□□ 0.69
LCMT2O60294 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.37■□□□□ 0.69
LCMT2O60294 AC091874.3-201ENST00000512672 1195 ntBASIC19.37■□□□□ 0.69
LCMT2O60294 C2orf69P4-201ENST00000565394 541 ntBASIC19.37■□□□□ 0.69
LCMT2O60294 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.37■□□□□ 0.69
LCMT2O60294 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.37■□□□□ 0.69
LCMT2O60294 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LCMT2O60294 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.37■□□□□ 0.69
LCMT2O60294 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LCMT2O60294 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms