Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
URB1O60287 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
URB1O60287 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
URB1O60287 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
URB1O60287 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
URB1O60287 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.14■□□□□ 0.66
URB1O60287 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.14■□□□□ 0.66
URB1O60287 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
URB1O60287 AC104076.2-201ENST00000448912 469 ntBASIC19.14■□□□□ 0.66
URB1O60287 KRT16P5-201ENST00000455284 522 ntBASIC19.14■□□□□ 0.66
URB1O60287 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.14■□□□□ 0.66
URB1O60287 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
URB1O60287 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
URB1O60287 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
URB1O60287 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.14■□□□□ 0.65
URB1O60287 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
URB1O60287 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
URB1O60287 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
URB1O60287 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.14■□□□□ 0.65
URB1O60287 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
URB1O60287 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
URB1O60287 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.14■□□□□ 0.65
URB1O60287 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
URB1O60287 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
URB1O60287 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.14■□□□□ 0.65
URB1O60287 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
URB1O60287 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.65
URB1O60287 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
URB1O60287 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
URB1O60287 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
URB1O60287 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
URB1O60287 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
URB1O60287 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
URB1O60287 AL137013.1-201ENST00000432946 1228 ntBASIC19.13■□□□□ 0.65
URB1O60287 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
URB1O60287 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.13■□□□□ 0.65
URB1O60287 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.13■□□□□ 0.65
URB1O60287 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
URB1O60287 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
URB1O60287 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
URB1O60287 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
URB1O60287 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
URB1O60287 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
URB1O60287 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
URB1O60287 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.13■□□□□ 0.65
URB1O60287 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
URB1O60287 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
URB1O60287 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.13■□□□□ 0.65
URB1O60287 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.13■□□□□ 0.65
URB1O60287 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.13■□□□□ 0.65
URB1O60287 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.13■□□□□ 0.65
URB1O60287 C2orf69P3-201ENST00000565542 1120 ntBASIC19.13■□□□□ 0.65
URB1O60287 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
URB1O60287 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
URB1O60287 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
URB1O60287 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
URB1O60287 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
URB1O60287 C1orf229-201ENST00000623686 2258 ntBASIC19.13■□□□□ 0.65
URB1O60287 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
URB1O60287 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
URB1O60287 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.12■□□□□ 0.65
URB1O60287 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.12■□□□□ 0.65
URB1O60287 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.12■□□□□ 0.65
URB1O60287 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
URB1O60287 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.12■□□□□ 0.65
URB1O60287 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
URB1O60287 NBPF21P-201ENST00000425093 1451 ntBASIC19.12■□□□□ 0.65
URB1O60287 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
URB1O60287 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
URB1O60287 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.12■□□□□ 0.65
URB1O60287 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
URB1O60287 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.12■□□□□ 0.65
URB1O60287 AC091076.1-201ENST00000610741 619 ntBASIC19.12■□□□□ 0.65
URB1O60287 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
URB1O60287 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
URB1O60287 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
URB1O60287 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.11■□□□□ 0.65
URB1O60287 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.11■□□□□ 0.65
URB1O60287 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.11■□□□□ 0.65
URB1O60287 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
URB1O60287 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.11■□□□□ 0.65
URB1O60287 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
URB1O60287 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
URB1O60287 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.11■□□□□ 0.65
URB1O60287 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.11■□□□□ 0.65
URB1O60287 AP000525.1-201ENST00000608286 694 ntBASIC19.11■□□□□ 0.65
URB1O60287 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.11■□□□□ 0.65
URB1O60287 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
URB1O60287 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
URB1O60287 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.11■□□□□ 0.65
URB1O60287 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
URB1O60287 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
URB1O60287 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
URB1O60287 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
URB1O60287 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
URB1O60287 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
URB1O60287 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
URB1O60287 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
URB1O60287 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
URB1O60287 AC116562.2-201ENST00000507042 360 ntBASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms