Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
IDH3BO43837 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
IDH3BO43837 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.52■□□□□ 0.56
IDH3BO43837 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
IDH3BO43837 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
IDH3BO43837 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.52■□□□□ 0.56
IDH3BO43837 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.52■□□□□ 0.56
IDH3BO43837 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
IDH3BO43837 AC018445.3-201ENST00000624177 1945 ntBASIC18.52■□□□□ 0.56
IDH3BO43837 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
IDH3BO43837 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.52■□□□□ 0.55
IDH3BO43837 FP700111.2-201ENST00000619190 1892 ntBASIC18.52■□□□□ 0.55
IDH3BO43837 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
IDH3BO43837 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.52■□□□□ 0.55
IDH3BO43837 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
IDH3BO43837 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
IDH3BO43837 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
IDH3BO43837 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
IDH3BO43837 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.51■□□□□ 0.55
IDH3BO43837 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IDH3BO43837 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
IDH3BO43837 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.51■□□□□ 0.55
IDH3BO43837 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
IDH3BO43837 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.51■□□□□ 0.55
IDH3BO43837 AC142381.2-201ENST00000566120 298 ntBASIC18.51■□□□□ 0.55
IDH3BO43837 AC120498.10-201ENST00000621827 505 ntBASIC18.51■□□□□ 0.55
IDH3BO43837 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IDH3BO43837 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
IDH3BO43837 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.51■□□□□ 0.55
IDH3BO43837 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
IDH3BO43837 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
IDH3BO43837 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
IDH3BO43837 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.5■□□□□ 0.55
IDH3BO43837 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
IDH3BO43837 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.5■□□□□ 0.55
IDH3BO43837 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
IDH3BO43837 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
IDH3BO43837 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IDH3BO43837 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
IDH3BO43837 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
IDH3BO43837 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IDH3BO43837 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IDH3BO43837 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IDH3BO43837 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.5■□□□□ 0.55
IDH3BO43837 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
IDH3BO43837 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.5■□□□□ 0.55
IDH3BO43837 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.5■□□□□ 0.55
IDH3BO43837 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
IDH3BO43837 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.5■□□□□ 0.55
IDH3BO43837 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
IDH3BO43837 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IDH3BO43837 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
IDH3BO43837 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
IDH3BO43837 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
IDH3BO43837 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IDH3BO43837 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
IDH3BO43837 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IDH3BO43837 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
IDH3BO43837 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
IDH3BO43837 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IDH3BO43837 AC245052.3-201ENST00000450182 901 ntBASIC18.49■□□□□ 0.55
IDH3BO43837 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
IDH3BO43837 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
IDH3BO43837 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IDH3BO43837 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
IDH3BO43837 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.49■□□□□ 0.55
IDH3BO43837 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
IDH3BO43837 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
IDH3BO43837 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IDH3BO43837 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IDH3BO43837 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.49■□□□□ 0.55
IDH3BO43837 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
IDH3BO43837 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IDH3BO43837 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
IDH3BO43837 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IDH3BO43837 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
IDH3BO43837 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
IDH3BO43837 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.48■□□□□ 0.55
IDH3BO43837 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
IDH3BO43837 AIRN-201ENST00000601203 4374 ntBASIC18.48■□□□□ 0.55
IDH3BO43837 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IDH3BO43837 IRS3P-201ENST00000223076 1006 ntBASIC18.48■□□□□ 0.55
IDH3BO43837 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
IDH3BO43837 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
IDH3BO43837 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.48■□□□□ 0.55
IDH3BO43837 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.48■□□□□ 0.55
IDH3BO43837 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
IDH3BO43837 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
IDH3BO43837 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.48■□□□□ 0.55
IDH3BO43837 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
IDH3BO43837 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
IDH3BO43837 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
IDH3BO43837 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
IDH3BO43837 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.47■□□□□ 0.55
IDH3BO43837 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
IDH3BO43837 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
IDH3BO43837 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.47■□□□□ 0.55
IDH3BO43837 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
IDH3BO43837 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
IDH3BO43837 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms