Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.08■□□□□ 0.48
TRAF3IP2O43734 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRAF3IP2O43734 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRAF3IP2O43734 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.08■□□□□ 0.48
TRAF3IP2O43734 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAF3IP2O43734 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.08■□□□□ 0.48
TRAF3IP2O43734 AC105020.6-201ENST00000621523 1217 ntBASIC18.08■□□□□ 0.48
TRAF3IP2O43734 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAF3IP2O43734 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRAF3IP2O43734 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRAF3IP2O43734 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAF3IP2O43734 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
TRAF3IP2O43734 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.08■□□□□ 0.48
TRAF3IP2O43734 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAF3IP2O43734 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.08■□□□□ 0.48
TRAF3IP2O43734 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAF3IP2O43734 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRAF3IP2O43734 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAF3IP2O43734 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.07■□□□□ 0.48
TRAF3IP2O43734 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAF3IP2O43734 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
TRAF3IP2O43734 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAF3IP2O43734 KRT18P68-201ENST00000392293 1000 ntBASIC18.07■□□□□ 0.48
TRAF3IP2O43734 AL355472.2-201ENST00000422958 438 ntBASIC18.07■□□□□ 0.48
TRAF3IP2O43734 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.07■□□□□ 0.48
TRAF3IP2O43734 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.07■□□□□ 0.48
TRAF3IP2O43734 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
TRAF3IP2O43734 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.07■□□□□ 0.48
TRAF3IP2O43734 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRAF3IP2O43734 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAF3IP2O43734 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
TRAF3IP2O43734 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.07■□□□□ 0.48
TRAF3IP2O43734 AL162377.1-201ENST00000618844 1793 ntBASIC18.07■□□□□ 0.48
TRAF3IP2O43734 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAF3IP2O43734 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAF3IP2O43734 AL512408.1-201ENST00000569378 2000 ntBASIC18.06■□□□□ 0.48
TRAF3IP2O43734 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAF3IP2O43734 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAF3IP2O43734 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAF3IP2O43734 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAF3IP2O43734 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAF3IP2O43734 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAF3IP2O43734 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.06■□□□□ 0.48
TRAF3IP2O43734 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAF3IP2O43734 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAF3IP2O43734 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TRAF3IP2O43734 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TRAF3IP2O43734 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.06■□□□□ 0.48
TRAF3IP2O43734 AC006970.2-201ENST00000450065 779 ntBASIC18.06■□□□□ 0.48
TRAF3IP2O43734 AF201337.1-201ENST00000520239 748 ntBASIC18.06■□□□□ 0.48
TRAF3IP2O43734 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAF3IP2O43734 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
TRAF3IP2O43734 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAF3IP2O43734 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.06■□□□□ 0.48
TRAF3IP2O43734 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAF3IP2O43734 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAF3IP2O43734 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.06■□□□□ 0.48
TRAF3IP2O43734 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAF3IP2O43734 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAF3IP2O43734 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAF3IP2O43734 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRAF3IP2O43734 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.05■□□□□ 0.48
TRAF3IP2O43734 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
TRAF3IP2O43734 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAF3IP2O43734 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAF3IP2O43734 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.05■□□□□ 0.48
TRAF3IP2O43734 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.05■□□□□ 0.48
TRAF3IP2O43734 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAF3IP2O43734 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.05■□□□□ 0.48
TRAF3IP2O43734 AC105036.2-201ENST00000569468 176 ntBASIC18.05■□□□□ 0.48
TRAF3IP2O43734 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.05■□□□□ 0.48
TRAF3IP2O43734 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.05■□□□□ 0.48
TRAF3IP2O43734 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAF3IP2O43734 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAF3IP2O43734 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
TRAF3IP2O43734 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAF3IP2O43734 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAF3IP2O43734 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAF3IP2O43734 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAF3IP2O43734 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAF3IP2O43734 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAF3IP2O43734 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAF3IP2O43734 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRAF3IP2O43734 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRAF3IP2O43734 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.04■□□□□ 0.48
TRAF3IP2O43734 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRAF3IP2O43734 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAF3IP2O43734 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.04■□□□□ 0.48
TRAF3IP2O43734 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAF3IP2O43734 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
TRAF3IP2O43734 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAF3IP2O43734 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAF3IP2O43734 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.04■□□□□ 0.48
TRAF3IP2O43734 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.04■□□□□ 0.48
TRAF3IP2O43734 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.04■□□□□ 0.48
TRAF3IP2O43734 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.04■□□□□ 0.48
TRAF3IP2O43734 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.04■□□□□ 0.48
TRAF3IP2O43734 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRAF3IP2O43734 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRAF3IP2O43734 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms