Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LRRC53A6NM62 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LRRC53A6NM62 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LRRC53A6NM62 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LRRC53A6NM62 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LRRC53A6NM62 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LRRC53A6NM62 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.84■■□□□ 1.09
LRRC53A6NM62 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LRRC53A6NM62 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.84■■□□□ 1.09
LRRC53A6NM62 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
LRRC53A6NM62 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
LRRC53A6NM62 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.84■■□□□ 1.09
LRRC53A6NM62 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
LRRC53A6NM62 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.84■■□□□ 1.09
LRRC53A6NM62 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LRRC53A6NM62 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LRRC53A6NM62 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
LRRC53A6NM62 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
LRRC53A6NM62 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LRRC53A6NM62 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
LRRC53A6NM62 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.84■■□□□ 1.09
LRRC53A6NM62 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.84■■□□□ 1.09
LRRC53A6NM62 FAM21FP-204ENST00000608637 956 ntBASIC21.84■■□□□ 1.09
LRRC53A6NM62 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.84■■□□□ 1.09
LRRC53A6NM62 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.84■■□□□ 1.09
LRRC53A6NM62 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
LRRC53A6NM62 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LRRC53A6NM62 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LRRC53A6NM62 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
LRRC53A6NM62 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LRRC53A6NM62 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.83■■□□□ 1.09
LRRC53A6NM62 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
LRRC53A6NM62 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.83■■□□□ 1.09
LRRC53A6NM62 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LRRC53A6NM62 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.83■■□□□ 1.09
LRRC53A6NM62 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.83■■□□□ 1.09
LRRC53A6NM62 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
LRRC53A6NM62 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
LRRC53A6NM62 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.83■■□□□ 1.08
LRRC53A6NM62 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
LRRC53A6NM62 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.83■■□□□ 1.08
LRRC53A6NM62 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
LRRC53A6NM62 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LRRC53A6NM62 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
LRRC53A6NM62 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LRRC53A6NM62 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
LRRC53A6NM62 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.82■■□□□ 1.08
LRRC53A6NM62 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LRRC53A6NM62 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
LRRC53A6NM62 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LRRC53A6NM62 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LRRC53A6NM62 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LRRC53A6NM62 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
LRRC53A6NM62 MYCNOS-205ENST00000641950 531 ntBASIC21.82■■□□□ 1.08
LRRC53A6NM62 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.82■■□□□ 1.08
LRRC53A6NM62 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LRRC53A6NM62 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LRRC53A6NM62 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LRRC53A6NM62 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.81■■□□□ 1.08
LRRC53A6NM62 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.81■■□□□ 1.08
LRRC53A6NM62 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LRRC53A6NM62 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
LRRC53A6NM62 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LRRC53A6NM62 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRRC53A6NM62 CDV3P1-201ENST00000471403 739 ntBASIC21.81■■□□□ 1.08
LRRC53A6NM62 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
LRRC53A6NM62 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.81■■□□□ 1.08
LRRC53A6NM62 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
LRRC53A6NM62 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.81■■□□□ 1.08
LRRC53A6NM62 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LRRC53A6NM62 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRRC53A6NM62 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
LRRC53A6NM62 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRRC53A6NM62 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRRC53A6NM62 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.8■■□□□ 1.08
LRRC53A6NM62 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
LRRC53A6NM62 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRRC53A6NM62 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.8■■□□□ 1.08
LRRC53A6NM62 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRRC53A6NM62 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
LRRC53A6NM62 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRRC53A6NM62 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRRC53A6NM62 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRRC53A6NM62 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRRC53A6NM62 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
LRRC53A6NM62 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRRC53A6NM62 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LRRC53A6NM62 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.8■■□□□ 1.08
LRRC53A6NM62 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.8■■□□□ 1.08
LRRC53A6NM62 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
LRRC53A6NM62 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LRRC53A6NM62 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.8■■□□□ 1.08
LRRC53A6NM62 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LRRC53A6NM62 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LRRC53A6NM62 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRRC53A6NM62 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRRC53A6NM62 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRRC53A6NM62 AL691432.2-201ENST00000607222 2038 ntBASIC21.8■■□□□ 1.08
LRRC53A6NM62 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRRC53A6NM62 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms