Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SSC5DA1L4H1 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SSC5DA1L4H1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
SSC5DA1L4H1 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SSC5DA1L4H1 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC23.84■■□□□ 1.41
SSC5DA1L4H1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SSC5DA1L4H1 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SSC5DA1L4H1 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SSC5DA1L4H1 TREX2-204ENST00000370212 861 ntTSL 5 BASIC23.84■■□□□ 1.41
SSC5DA1L4H1 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
SSC5DA1L4H1 AC005521.1-201ENST00000393351 872 ntBASIC23.84■■□□□ 1.41
SSC5DA1L4H1 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
SSC5DA1L4H1 AC113347.1-201ENST00000413321 391 ntBASIC23.84■■□□□ 1.41
SSC5DA1L4H1 KRT18P57-201ENST00000443599 1254 ntBASIC23.84■■□□□ 1.41
SSC5DA1L4H1 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC23.84■■□□□ 1.41
SSC5DA1L4H1 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC23.84■■□□□ 1.41
SSC5DA1L4H1 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC23.84■■□□□ 1.41
SSC5DA1L4H1 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC23.84■■□□□ 1.41
SSC5DA1L4H1 AC073195.1-201ENST00000607241 877 ntBASIC23.84■■□□□ 1.41
SSC5DA1L4H1 AL121906.2-201ENST00000621597 723 ntBASIC23.84■■□□□ 1.41
SSC5DA1L4H1 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC23.84■■□□□ 1.41
SSC5DA1L4H1 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
SSC5DA1L4H1 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
SSC5DA1L4H1 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SSC5DA1L4H1 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
SSC5DA1L4H1 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SSC5DA1L4H1 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
SSC5DA1L4H1 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SSC5DA1L4H1 AC242852.2-201ENST00000615738 1807 ntBASIC23.83■■□□□ 1.41
SSC5DA1L4H1 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SSC5DA1L4H1 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC23.83■■□□□ 1.41
SSC5DA1L4H1 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SSC5DA1L4H1 NT5C-211ENST00000582170 653 ntTSL 3 BASIC23.83■■□□□ 1.41
SSC5DA1L4H1 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC23.83■■□□□ 1.41
SSC5DA1L4H1 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.83■■□□□ 1.41
SSC5DA1L4H1 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SSC5DA1L4H1 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
SSC5DA1L4H1 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
SSC5DA1L4H1 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SSC5DA1L4H1 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
SSC5DA1L4H1 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
SSC5DA1L4H1 AL390955.1-201ENST00000428694 934 ntBASIC23.82■■□□□ 1.4
SSC5DA1L4H1 DUT-205ENST00000558813 769 ntTSL 2 BASIC23.82■■□□□ 1.4
SSC5DA1L4H1 AL049597.2-201ENST00000565575 961 ntBASIC23.82■■□□□ 1.4
SSC5DA1L4H1 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC23.82■■□□□ 1.4
SSC5DA1L4H1 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC23.82■■□□□ 1.4
SSC5DA1L4H1 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC23.82■■□□□ 1.4
SSC5DA1L4H1 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC23.82■■□□□ 1.4
SSC5DA1L4H1 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SSC5DA1L4H1 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC23.82■■□□□ 1.4
SSC5DA1L4H1 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SSC5DA1L4H1 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SSC5DA1L4H1 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC23.82■■□□□ 1.4
SSC5DA1L4H1 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SSC5DA1L4H1 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SSC5DA1L4H1 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SSC5DA1L4H1 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
SSC5DA1L4H1 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC23.82■■□□□ 1.4
SSC5DA1L4H1 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SSC5DA1L4H1 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC23.81■■□□□ 1.4
SSC5DA1L4H1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
SSC5DA1L4H1 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC23.81■■□□□ 1.4
SSC5DA1L4H1 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
SSC5DA1L4H1 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
SSC5DA1L4H1 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
SSC5DA1L4H1 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SSC5DA1L4H1 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
SSC5DA1L4H1 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SSC5DA1L4H1 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SSC5DA1L4H1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SSC5DA1L4H1 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SSC5DA1L4H1 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC23.8■■□□□ 1.4
SSC5DA1L4H1 GLDC-219ENST00000640208 420 ntTSL 2 BASIC23.8■■□□□ 1.4
SSC5DA1L4H1 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SSC5DA1L4H1 CYP2D8P-201ENST00000433633 1490 ntBASIC23.8■■□□□ 1.4
SSC5DA1L4H1 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC23.8■■□□□ 1.4
SSC5DA1L4H1 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SSC5DA1L4H1 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC23.8■■□□□ 1.4
SSC5DA1L4H1 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SSC5DA1L4H1 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SSC5DA1L4H1 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SSC5DA1L4H1 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.8■■□□□ 1.4
SSC5DA1L4H1 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.79■■□□□ 1.4
SSC5DA1L4H1 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SSC5DA1L4H1 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.79■■□□□ 1.4
SSC5DA1L4H1 TERF1P1-201ENST00000311003 1181 ntBASIC23.79■■□□□ 1.4
SSC5DA1L4H1 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SSC5DA1L4H1 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SSC5DA1L4H1 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC23.79■■□□□ 1.4
SSC5DA1L4H1 PNN-205ENST00000556530 601 ntTSL 2 BASIC23.79■■□□□ 1.4
SSC5DA1L4H1 AL031963.3-201ENST00000606441 850 ntBASIC23.79■■□□□ 1.4
SSC5DA1L4H1 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SSC5DA1L4H1 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SSC5DA1L4H1 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SSC5DA1L4H1 KRT8P36-201ENST00000489121 1440 ntBASIC23.79■■□□□ 1.4
SSC5DA1L4H1 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SSC5DA1L4H1 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SSC5DA1L4H1 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC23.78■■□□□ 1.4
SSC5DA1L4H1 UNC93B2-201ENST00000285383 730 ntBASIC23.78■■□□□ 1.4
SSC5DA1L4H1 ARMC10P1-201ENST00000313754 855 ntBASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms