Protein–RNA interactions for Protein: A0PK11

CLRN2, Clarin-2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN2A0PK11 AC011484.1-201ENST00000377652 1995 ntBASIC24.17■■□□□ 1.46
CLRN2A0PK11 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CLRN2A0PK11 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CLRN2A0PK11 RCN1P1-201ENST00000400413 996 ntBASIC24.17■■□□□ 1.46
CLRN2A0PK11 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC24.17■■□□□ 1.46
CLRN2A0PK11 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC24.17■■□□□ 1.46
CLRN2A0PK11 AC012306.2-201ENST00000609350 630 ntBASIC24.17■■□□□ 1.46
CLRN2A0PK11 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CLRN2A0PK11 AC097493.4-201ENST00000641197 219 ntBASIC24.17■■□□□ 1.46
CLRN2A0PK11 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC24.17■■□□□ 1.46
CLRN2A0PK11 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CLRN2A0PK11 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC24.17■■□□□ 1.46
CLRN2A0PK11 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CLRN2A0PK11 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC24.16■■□□□ 1.46
CLRN2A0PK11 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CLRN2A0PK11 HTR7P1-201ENST00000538670 1336 ntBASIC24.16■■□□□ 1.46
CLRN2A0PK11 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
CLRN2A0PK11 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CLRN2A0PK11 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CLRN2A0PK11 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CLRN2A0PK11 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CLRN2A0PK11 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CLRN2A0PK11 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC24.16■■□□□ 1.46
CLRN2A0PK11 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CLRN2A0PK11 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC24.16■■□□□ 1.46
CLRN2A0PK11 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC24.16■■□□□ 1.46
CLRN2A0PK11 AP003071.4-201ENST00000562276 1284 ntBASIC24.16■■□□□ 1.46
CLRN2A0PK11 GRAP-204ENST00000573099 846 ntTSL 3 BASIC24.16■■□□□ 1.46
CLRN2A0PK11 AL353708.3-201ENST00000610272 989 ntBASIC24.16■■□□□ 1.46
CLRN2A0PK11 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
CLRN2A0PK11 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
CLRN2A0PK11 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CLRN2A0PK11 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CLRN2A0PK11 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CLRN2A0PK11 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CLRN2A0PK11 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC24.15■■□□□ 1.46
CLRN2A0PK11 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CLRN2A0PK11 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CLRN2A0PK11 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC24.15■■□□□ 1.46
CLRN2A0PK11 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CLRN2A0PK11 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC24.15■■□□□ 1.46
CLRN2A0PK11 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CLRN2A0PK11 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CLRN2A0PK11 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CLRN2A0PK11 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CLRN2A0PK11 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.46
CLRN2A0PK11 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.46
CLRN2A0PK11 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC24.14■■□□□ 1.46
CLRN2A0PK11 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.46
CLRN2A0PK11 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CLRN2A0PK11 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CLRN2A0PK11 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CLRN2A0PK11 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.45
CLRN2A0PK11 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CLRN2A0PK11 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC24.14■■□□□ 1.45
CLRN2A0PK11 AF186192.3-201ENST00000583427 947 ntBASIC24.14■■□□□ 1.45
CLRN2A0PK11 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
CLRN2A0PK11 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CLRN2A0PK11 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CLRN2A0PK11 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC24.13■■□□□ 1.45
CLRN2A0PK11 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
CLRN2A0PK11 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CLRN2A0PK11 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
CLRN2A0PK11 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC24.13■■□□□ 1.45
CLRN2A0PK11 PPOX-219ENST00000544598 813 ntTSL 2 BASIC24.13■■□□□ 1.45
CLRN2A0PK11 RPS15-203ENST00000586096 570 ntTSL 2 BASIC24.13■■□□□ 1.45
CLRN2A0PK11 AL121829.2-201ENST00000620908 328 ntBASIC24.13■■□□□ 1.45
CLRN2A0PK11 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC24.13■■□□□ 1.45
CLRN2A0PK11 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CLRN2A0PK11 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC24.12■■□□□ 1.45
CLRN2A0PK11 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
CLRN2A0PK11 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
CLRN2A0PK11 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
CLRN2A0PK11 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CLRN2A0PK11 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
CLRN2A0PK11 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC24.12■■□□□ 1.45
CLRN2A0PK11 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
CLRN2A0PK11 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC24.12■■□□□ 1.45
CLRN2A0PK11 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC24.12■■□□□ 1.45
CLRN2A0PK11 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC24.12■■□□□ 1.45
CLRN2A0PK11 CD177P1-201ENST00000606252 935 ntBASIC24.12■■□□□ 1.45
CLRN2A0PK11 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CLRN2A0PK11 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC24.12■■□□□ 1.45
CLRN2A0PK11 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC24.12■■□□□ 1.45
CLRN2A0PK11 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
CLRN2A0PK11 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CLRN2A0PK11 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CLRN2A0PK11 TUB-203ENST00000534099 1759 ntTSL 2 BASIC24.11■■□□□ 1.45
CLRN2A0PK11 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC24.11■■□□□ 1.45
CLRN2A0PK11 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CLRN2A0PK11 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CLRN2A0PK11 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC24.11■■□□□ 1.45
CLRN2A0PK11 ECEL1P1-201ENST00000373592 1742 ntBASIC24.11■■□□□ 1.45
CLRN2A0PK11 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CLRN2A0PK11 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC24.11■■□□□ 1.45
CLRN2A0PK11 FAM197Y1-201ENST00000421178 764 ntBASIC24.11■■□□□ 1.45
CLRN2A0PK11 AL355355.2-201ENST00000442321 338 ntBASIC24.11■■□□□ 1.45
CLRN2A0PK11 F2R-202ENST00000505600 442 ntTSL 2 BASIC24.11■■□□□ 1.45
CLRN2A0PK11 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC24.11■■□□□ 1.45
CLRN2A0PK11 TK2-213ENST00000563369 882 ntTSL 5 BASIC24.11■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms