Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
TRBV6-4A0A1B0GX49 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV6-4A0A1B0GX49 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TRBV6-4A0A1B0GX49 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV6-4A0A1B0GX49 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC14.31□□□□□ -0.12
TRBV6-4A0A1B0GX49 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC14.31□□□□□ -0.12
TRBV6-4A0A1B0GX49 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV6-4A0A1B0GX49 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC14.31□□□□□ -0.12
TRBV6-4A0A1B0GX49 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV6-4A0A1B0GX49 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TRBV6-4A0A1B0GX49 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC14.31□□□□□ -0.12
TRBV6-4A0A1B0GX49 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV6-4A0A1B0GX49 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-4A0A1B0GX49 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC14.3□□□□□ -0.12
TRBV6-4A0A1B0GX49 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-4A0A1B0GX49 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-4A0A1B0GX49 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-4A0A1B0GX49 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-4A0A1B0GX49 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-4A0A1B0GX49 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC14.3□□□□□ -0.12
TRBV6-4A0A1B0GX49 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-4A0A1B0GX49 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-4A0A1B0GX49 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC14.3□□□□□ -0.12
TRBV6-4A0A1B0GX49 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-4A0A1B0GX49 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-4A0A1B0GX49 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC14.3□□□□□ -0.12
TRBV6-4A0A1B0GX49 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC14.3□□□□□ -0.12
TRBV6-4A0A1B0GX49 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC14.3□□□□□ -0.12
TRBV6-4A0A1B0GX49 AL356652.1-201ENST00000615962 565 ntBASIC14.3□□□□□ -0.12
TRBV6-4A0A1B0GX49 AC100791.3-201ENST00000617619 330 ntBASIC14.3□□□□□ -0.12
TRBV6-4A0A1B0GX49 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC14.3□□□□□ -0.12
TRBV6-4A0A1B0GX49 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-4A0A1B0GX49 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-4A0A1B0GX49 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-4A0A1B0GX49 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-4A0A1B0GX49 GAS2L1P2-201ENST00000436355 1356 ntBASIC14.3□□□□□ -0.12
TRBV6-4A0A1B0GX49 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-4A0A1B0GX49 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-4A0A1B0GX49 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-4A0A1B0GX49 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC14.3□□□□□ -0.12
TRBV6-4A0A1B0GX49 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-4A0A1B0GX49 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC14.29□□□□□ -0.12
TRBV6-4A0A1B0GX49 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-4A0A1B0GX49 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-4A0A1B0GX49 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC14.29□□□□□ -0.12
TRBV6-4A0A1B0GX49 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-4A0A1B0GX49 USP39-204ENST00000409766 2033 ntTSL 2 BASIC14.29□□□□□ -0.12
TRBV6-4A0A1B0GX49 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-4A0A1B0GX49 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-4A0A1B0GX49 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-4A0A1B0GX49 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-4A0A1B0GX49 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TRBV6-4A0A1B0GX49 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-4A0A1B0GX49 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
TRBV6-4A0A1B0GX49 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC14.29□□□□□ -0.12
TRBV6-4A0A1B0GX49 AC006015.1-201ENST00000429970 570 ntBASIC14.29□□□□□ -0.12
TRBV6-4A0A1B0GX49 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC14.29□□□□□ -0.12
TRBV6-4A0A1B0GX49 MFSD11-216ENST00000590393 1141 ntBASIC14.29□□□□□ -0.12
TRBV6-4A0A1B0GX49 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-4A0A1B0GX49 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-4A0A1B0GX49 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-4A0A1B0GX49 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
TRBV6-4A0A1B0GX49 CYP21A1P-202ENST00000354927 1481 ntBASIC14.29□□□□□ -0.12
TRBV6-4A0A1B0GX49 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-4A0A1B0GX49 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TRBV6-4A0A1B0GX49 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-4A0A1B0GX49 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-4A0A1B0GX49 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
TRBV6-4A0A1B0GX49 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-4A0A1B0GX49 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC14.29□□□□□ -0.12
TRBV6-4A0A1B0GX49 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-4A0A1B0GX49 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-4A0A1B0GX49 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-4A0A1B0GX49 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC14.28□□□□□ -0.12
TRBV6-4A0A1B0GX49 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-4A0A1B0GX49 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-4A0A1B0GX49 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-4A0A1B0GX49 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-4A0A1B0GX49 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRBV6-4A0A1B0GX49 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-4A0A1B0GX49 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
TRBV6-4A0A1B0GX49 BET1L-204ENST00000410108 637 ntTSL 3 BASIC14.28□□□□□ -0.12
TRBV6-4A0A1B0GX49 UQCRFS1P1-201ENST00000435169 820 ntBASIC14.28□□□□□ -0.12
TRBV6-4A0A1B0GX49 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC14.28□□□□□ -0.12
TRBV6-4A0A1B0GX49 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC14.28□□□□□ -0.12
TRBV6-4A0A1B0GX49 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-4A0A1B0GX49 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
TRBV6-4A0A1B0GX49 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-4A0A1B0GX49 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-4A0A1B0GX49 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-4A0A1B0GX49 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC14.28□□□□□ -0.12
TRBV6-4A0A1B0GX49 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC14.28□□□□□ -0.12
TRBV6-4A0A1B0GX49 BID-214ENST00000617586 542 ntTSL 5 BASIC14.28□□□□□ -0.12
TRBV6-4A0A1B0GX49 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
TRBV6-4A0A1B0GX49 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-4A0A1B0GX49 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-4A0A1B0GX49 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-4A0A1B0GX49 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV6-4A0A1B0GX49 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV6-4A0A1B0GX49 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms