Protein–RNA interactions for Protein: A0A0K0K1A3

TRBV10-1, T-cell receptor beta variable 10-1(gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV10-1A0A0K0K1A3 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV10-1A0A0K0K1A3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC14.31□□□□□ -0.12
TRBV10-1A0A0K0K1A3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC14.31□□□□□ -0.12
TRBV10-1A0A0K0K1A3 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC14.31□□□□□ -0.12
TRBV10-1A0A0K0K1A3 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TRBV10-1A0A0K0K1A3 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
TRBV10-1A0A0K0K1A3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TRBV10-1A0A0K0K1A3 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV10-1A0A0K0K1A3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC14.3□□□□□ -0.12
TRBV10-1A0A0K0K1A3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV10-1A0A0K0K1A3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV10-1A0A0K0K1A3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TRBV10-1A0A0K0K1A3 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV10-1A0A0K0K1A3 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
TRBV10-1A0A0K0K1A3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV10-1A0A0K0K1A3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC14.3□□□□□ -0.12
TRBV10-1A0A0K0K1A3 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC14.3□□□□□ -0.12
TRBV10-1A0A0K0K1A3 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC14.3□□□□□ -0.12
TRBV10-1A0A0K0K1A3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC14.3□□□□□ -0.12
TRBV10-1A0A0K0K1A3 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC14.3□□□□□ -0.12
TRBV10-1A0A0K0K1A3 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV10-1A0A0K0K1A3 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV10-1A0A0K0K1A3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
TRBV10-1A0A0K0K1A3 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV10-1A0A0K0K1A3 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV10-1A0A0K0K1A3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC14.3□□□□□ -0.12
TRBV10-1A0A0K0K1A3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV10-1A0A0K0K1A3 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV10-1A0A0K0K1A3 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV10-1A0A0K0K1A3 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC14.29□□□□□ -0.12
TRBV10-1A0A0K0K1A3 TCF3P1-201ENST00000423021 1937 ntBASIC14.29□□□□□ -0.12
TRBV10-1A0A0K0K1A3 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV10-1A0A0K0K1A3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV10-1A0A0K0K1A3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV10-1A0A0K0K1A3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TRBV10-1A0A0K0K1A3 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV10-1A0A0K0K1A3 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV10-1A0A0K0K1A3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV10-1A0A0K0K1A3 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV10-1A0A0K0K1A3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV10-1A0A0K0K1A3 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC14.29□□□□□ -0.12
TRBV10-1A0A0K0K1A3 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV10-1A0A0K0K1A3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC14.29□□□□□ -0.12
TRBV10-1A0A0K0K1A3 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC14.29□□□□□ -0.12
TRBV10-1A0A0K0K1A3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC14.29□□□□□ -0.12
TRBV10-1A0A0K0K1A3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV10-1A0A0K0K1A3 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV10-1A0A0K0K1A3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV10-1A0A0K0K1A3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV10-1A0A0K0K1A3 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC14.29□□□□□ -0.12
TRBV10-1A0A0K0K1A3 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV10-1A0A0K0K1A3 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV10-1A0A0K0K1A3 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TRBV10-1A0A0K0K1A3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV10-1A0A0K0K1A3 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC14.29□□□□□ -0.12
TRBV10-1A0A0K0K1A3 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV10-1A0A0K0K1A3 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TRBV10-1A0A0K0K1A3 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC14.29□□□□□ -0.12
TRBV10-1A0A0K0K1A3 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV10-1A0A0K0K1A3 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV10-1A0A0K0K1A3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV10-1A0A0K0K1A3 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV10-1A0A0K0K1A3 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV10-1A0A0K0K1A3 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV10-1A0A0K0K1A3 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRBV10-1A0A0K0K1A3 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV10-1A0A0K0K1A3 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV10-1A0A0K0K1A3 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC14.28□□□□□ -0.12
TRBV10-1A0A0K0K1A3 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV10-1A0A0K0K1A3 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC14.28□□□□□ -0.12
TRBV10-1A0A0K0K1A3 AL162412.1-201ENST00000567129 965 ntBASIC14.28□□□□□ -0.12
TRBV10-1A0A0K0K1A3 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC14.28□□□□□ -0.12
TRBV10-1A0A0K0K1A3 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC14.28□□□□□ -0.12
TRBV10-1A0A0K0K1A3 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV10-1A0A0K0K1A3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC14.28□□□□□ -0.12
TRBV10-1A0A0K0K1A3 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
TRBV10-1A0A0K0K1A3 MYCNOS-205ENST00000641950 531 ntBASIC14.28□□□□□ -0.12
TRBV10-1A0A0K0K1A3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV10-1A0A0K0K1A3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC14.27□□□□□ -0.12
TRBV10-1A0A0K0K1A3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV10-1A0A0K0K1A3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV10-1A0A0K0K1A3 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV10-1A0A0K0K1A3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC14.27□□□□□ -0.12
TRBV10-1A0A0K0K1A3 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV10-1A0A0K0K1A3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV10-1A0A0K0K1A3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
TRBV10-1A0A0K0K1A3 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRBV10-1A0A0K0K1A3 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
TRBV10-1A0A0K0K1A3 KRT18P11-201ENST00000435214 1283 ntBASIC14.27□□□□□ -0.13
TRBV10-1A0A0K0K1A3 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC14.27□□□□□ -0.13
TRBV10-1A0A0K0K1A3 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRBV10-1A0A0K0K1A3 CASP6-205ENST00000505486 538 ntTSL 4 BASIC14.27□□□□□ -0.13
TRBV10-1A0A0K0K1A3 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
TRBV10-1A0A0K0K1A3 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC14.27□□□□□ -0.13
TRBV10-1A0A0K0K1A3 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRBV10-1A0A0K0K1A3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRBV10-1A0A0K0K1A3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
TRBV10-1A0A0K0K1A3 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC14.27□□□□□ -0.13
TRBV10-1A0A0K0K1A3 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRBV10-1A0A0K0K1A3 AL391422.3-201ENST00000603791 2761 ntBASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms