Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV4-1A0A0J9YWV2 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TRBV4-1A0A0J9YWV2 DPP3P2-201ENST00000416030 1696 ntBASIC18.57■□□□□ 0.56
TRBV4-1A0A0J9YWV2 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.57■□□□□ 0.56
TRBV4-1A0A0J9YWV2 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.57■□□□□ 0.56
TRBV4-1A0A0J9YWV2 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TRBV4-1A0A0J9YWV2 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV4-1A0A0J9YWV2 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
TRBV4-1A0A0J9YWV2 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV4-1A0A0J9YWV2 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.57■□□□□ 0.56
TRBV4-1A0A0J9YWV2 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV4-1A0A0J9YWV2 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV4-1A0A0J9YWV2 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
TRBV4-1A0A0J9YWV2 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TRBV4-1A0A0J9YWV2 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.57■□□□□ 0.56
TRBV4-1A0A0J9YWV2 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TRBV4-1A0A0J9YWV2 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV4-1A0A0J9YWV2 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.57■□□□□ 0.56
TRBV4-1A0A0J9YWV2 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
TRBV4-1A0A0J9YWV2 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV4-1A0A0J9YWV2 LINC02228-203ENST00000641970 1355 ntBASIC18.56■□□□□ 0.56
TRBV4-1A0A0J9YWV2 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV4-1A0A0J9YWV2 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
TRBV4-1A0A0J9YWV2 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
TRBV4-1A0A0J9YWV2 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
TRBV4-1A0A0J9YWV2 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV4-1A0A0J9YWV2 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV4-1A0A0J9YWV2 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TRBV4-1A0A0J9YWV2 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV4-1A0A0J9YWV2 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.56■□□□□ 0.56
TRBV4-1A0A0J9YWV2 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TRBV4-1A0A0J9YWV2 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.56■□□□□ 0.56
TRBV4-1A0A0J9YWV2 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV4-1A0A0J9YWV2 AC091799.1-201ENST00000422823 811 ntBASIC18.56■□□□□ 0.56
TRBV4-1A0A0J9YWV2 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.56■□□□□ 0.56
TRBV4-1A0A0J9YWV2 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TRBV4-1A0A0J9YWV2 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV4-1A0A0J9YWV2 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV4-1A0A0J9YWV2 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TRBV4-1A0A0J9YWV2 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV4-1A0A0J9YWV2 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.56■□□□□ 0.56
TRBV4-1A0A0J9YWV2 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
TRBV4-1A0A0J9YWV2 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
TRBV4-1A0A0J9YWV2 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TRBV4-1A0A0J9YWV2 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TRBV4-1A0A0J9YWV2 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV4-1A0A0J9YWV2 AL691432.2-201ENST00000607222 2038 ntBASIC18.56■□□□□ 0.56
TRBV4-1A0A0J9YWV2 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV4-1A0A0J9YWV2 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.55■□□□□ 0.56
TRBV4-1A0A0J9YWV2 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV4-1A0A0J9YWV2 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV4-1A0A0J9YWV2 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV4-1A0A0J9YWV2 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.55■□□□□ 0.56
TRBV4-1A0A0J9YWV2 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV4-1A0A0J9YWV2 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV4-1A0A0J9YWV2 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TRBV4-1A0A0J9YWV2 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.55■□□□□ 0.56
TRBV4-1A0A0J9YWV2 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.55■□□□□ 0.56
TRBV4-1A0A0J9YWV2 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.55■□□□□ 0.56
TRBV4-1A0A0J9YWV2 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV4-1A0A0J9YWV2 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV4-1A0A0J9YWV2 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV4-1A0A0J9YWV2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV4-1A0A0J9YWV2 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV4-1A0A0J9YWV2 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV4-1A0A0J9YWV2 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TRBV4-1A0A0J9YWV2 AC105265.2-201ENST00000467189 838 ntBASIC18.55■□□□□ 0.56
TRBV4-1A0A0J9YWV2 CCDC92B-201ENST00000575506 885 ntBASIC18.55■□□□□ 0.56
TRBV4-1A0A0J9YWV2 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV4-1A0A0J9YWV2 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV4-1A0A0J9YWV2 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV4-1A0A0J9YWV2 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
TRBV4-1A0A0J9YWV2 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV4-1A0A0J9YWV2 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV4-1A0A0J9YWV2 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV4-1A0A0J9YWV2 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV4-1A0A0J9YWV2 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
TRBV4-1A0A0J9YWV2 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV4-1A0A0J9YWV2 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TRBV4-1A0A0J9YWV2 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV4-1A0A0J9YWV2 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV4-1A0A0J9YWV2 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TRBV4-1A0A0J9YWV2 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.54■□□□□ 0.56
TRBV4-1A0A0J9YWV2 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV4-1A0A0J9YWV2 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.54■□□□□ 0.56
TRBV4-1A0A0J9YWV2 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
TRBV4-1A0A0J9YWV2 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV4-1A0A0J9YWV2 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV4-1A0A0J9YWV2 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.54■□□□□ 0.56
TRBV4-1A0A0J9YWV2 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV4-1A0A0J9YWV2 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV4-1A0A0J9YWV2 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV4-1A0A0J9YWV2 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TRBV4-1A0A0J9YWV2 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV4-1A0A0J9YWV2 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV4-1A0A0J9YWV2 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV4-1A0A0J9YWV2 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV4-1A0A0J9YWV2 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TRBV4-1A0A0J9YWV2 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV4-1A0A0J9YWV2 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms