Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV41A0A0B4J266 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV41A0A0B4J266 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC15.96■□□□□ 0.15
TRAV41A0A0B4J266 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRAV41A0A0B4J266 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRAV41A0A0B4J266 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRAV41A0A0B4J266 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRAV41A0A0B4J266 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
TRAV41A0A0B4J266 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAV41A0A0B4J266 NXN-202ENST00000537628 1340 ntTSL 3 BASIC15.95■□□□□ 0.14
TRAV41A0A0B4J266 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAV41A0A0B4J266 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV41A0A0B4J266 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
TRAV41A0A0B4J266 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
TRAV41A0A0B4J266 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC15.95■□□□□ 0.14
TRAV41A0A0B4J266 DUSP5P2-201ENST00000426873 1033 ntBASIC15.95■□□□□ 0.14
TRAV41A0A0B4J266 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAV41A0A0B4J266 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC15.95■□□□□ 0.14
TRAV41A0A0B4J266 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAV41A0A0B4J266 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC15.95■□□□□ 0.14
TRAV41A0A0B4J266 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV41A0A0B4J266 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV41A0A0B4J266 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV41A0A0B4J266 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV41A0A0B4J266 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV41A0A0B4J266 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV41A0A0B4J266 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV41A0A0B4J266 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV41A0A0B4J266 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV41A0A0B4J266 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV41A0A0B4J266 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV41A0A0B4J266 STK25-205ENST00000405883 1904 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV41A0A0B4J266 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
TRAV41A0A0B4J266 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV41A0A0B4J266 STX6-204ENST00000542060 4809 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV41A0A0B4J266 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
TRAV41A0A0B4J266 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV41A0A0B4J266 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
TRAV41A0A0B4J266 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC15.94■□□□□ 0.14
TRAV41A0A0B4J266 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV41A0A0B4J266 AC069152.1-201ENST00000438030 544 ntBASIC15.94■□□□□ 0.14
TRAV41A0A0B4J266 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
TRAV41A0A0B4J266 OR2A1-AS1-201ENST00000462305 773 ntBASIC15.94■□□□□ 0.14
TRAV41A0A0B4J266 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC15.94■□□□□ 0.14
TRAV41A0A0B4J266 RGMA-211ENST00000557420 989 ntTSL 3 BASIC15.94■□□□□ 0.14
TRAV41A0A0B4J266 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC15.94■□□□□ 0.14
TRAV41A0A0B4J266 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
TRAV41A0A0B4J266 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV41A0A0B4J266 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV41A0A0B4J266 AC092720.2-201ENST00000602388 1665 ntBASIC15.94■□□□□ 0.14
TRAV41A0A0B4J266 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
TRAV41A0A0B4J266 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV41A0A0B4J266 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV41A0A0B4J266 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC15.94■□□□□ 0.14
TRAV41A0A0B4J266 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV41A0A0B4J266 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV41A0A0B4J266 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV41A0A0B4J266 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV41A0A0B4J266 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV41A0A0B4J266 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV41A0A0B4J266 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV41A0A0B4J266 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC15.94■□□□□ 0.14
TRAV41A0A0B4J266 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV41A0A0B4J266 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
TRAV41A0A0B4J266 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
TRAV41A0A0B4J266 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV41A0A0B4J266 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC15.93■□□□□ 0.14
TRAV41A0A0B4J266 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV41A0A0B4J266 USP48-205ENST00000421625 2818 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV41A0A0B4J266 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV41A0A0B4J266 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
TRAV41A0A0B4J266 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV41A0A0B4J266 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
TRAV41A0A0B4J266 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC15.93■□□□□ 0.14
TRAV41A0A0B4J266 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC15.93■□□□□ 0.14
TRAV41A0A0B4J266 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV41A0A0B4J266 AC073210.2-201ENST00000430369 194 ntBASIC15.93■□□□□ 0.14
TRAV41A0A0B4J266 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV41A0A0B4J266 AC097658.1-201ENST00000475555 843 ntBASIC15.93■□□□□ 0.14
TRAV41A0A0B4J266 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV41A0A0B4J266 AC091874.3-201ENST00000512672 1195 ntBASIC15.93■□□□□ 0.14
TRAV41A0A0B4J266 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV41A0A0B4J266 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV41A0A0B4J266 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV41A0A0B4J266 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
TRAV41A0A0B4J266 C2orf69P4-201ENST00000565394 541 ntBASIC15.93■□□□□ 0.14
TRAV41A0A0B4J266 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV41A0A0B4J266 BRWD1-AS2-201ENST00000603064 1028 ntBASIC15.93■□□□□ 0.14
TRAV41A0A0B4J266 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC15.93■□□□□ 0.14
TRAV41A0A0B4J266 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV41A0A0B4J266 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV41A0A0B4J266 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV41A0A0B4J266 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV41A0A0B4J266 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV41A0A0B4J266 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV41A0A0B4J266 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV41A0A0B4J266 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
TRAV41A0A0B4J266 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV41A0A0B4J266 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV41A0A0B4J266 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms