Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV10A0A0B4J240 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TRAV10A0A0B4J240 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAV10A0A0B4J240 Z98882.1-201ENST00000622160 2253 ntBASIC14.31□□□□□ -0.12
TRAV10A0A0B4J240 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV10A0A0B4J240 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV10A0A0B4J240 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV10A0A0B4J240 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV10A0A0B4J240 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV10A0A0B4J240 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV10A0A0B4J240 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV10A0A0B4J240 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV10A0A0B4J240 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
TRAV10A0A0B4J240 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV10A0A0B4J240 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV10A0A0B4J240 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TRAV10A0A0B4J240 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC14.31□□□□□ -0.12
TRAV10A0A0B4J240 STX6-204ENST00000542060 4809 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV10A0A0B4J240 FBXW4P1-201ENST00000426721 2239 ntBASIC14.31□□□□□ -0.12
TRAV10A0A0B4J240 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV10A0A0B4J240 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAV10A0A0B4J240 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV10A0A0B4J240 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV10A0A0B4J240 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV10A0A0B4J240 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV10A0A0B4J240 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV10A0A0B4J240 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV10A0A0B4J240 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV10A0A0B4J240 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV10A0A0B4J240 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV10A0A0B4J240 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
TRAV10A0A0B4J240 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAV10A0A0B4J240 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
TRAV10A0A0B4J240 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV10A0A0B4J240 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TRAV10A0A0B4J240 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV10A0A0B4J240 RER1-204ENST00000378518 522 ntTSL 3 BASIC14.3□□□□□ -0.12
TRAV10A0A0B4J240 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC14.3□□□□□ -0.12
TRAV10A0A0B4J240 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
TRAV10A0A0B4J240 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV10A0A0B4J240 SERP1-205ENST00000487153 657 ntTSL 4 BASIC14.3□□□□□ -0.12
TRAV10A0A0B4J240 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV10A0A0B4J240 AC005829.2-201ENST00000571422 1056 ntBASIC14.3□□□□□ -0.12
TRAV10A0A0B4J240 AC069544.1-201ENST00000609399 999 ntBASIC14.3□□□□□ -0.12
TRAV10A0A0B4J240 AL359736.2-201ENST00000621992 437 ntBASIC14.3□□□□□ -0.12
TRAV10A0A0B4J240 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV10A0A0B4J240 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV10A0A0B4J240 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV10A0A0B4J240 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV10A0A0B4J240 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV10A0A0B4J240 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV10A0A0B4J240 STK25-234ENST00000535007 2459 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV10A0A0B4J240 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV10A0A0B4J240 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV10A0A0B4J240 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV10A0A0B4J240 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TRAV10A0A0B4J240 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV10A0A0B4J240 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV10A0A0B4J240 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
TRAV10A0A0B4J240 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV10A0A0B4J240 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV10A0A0B4J240 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV10A0A0B4J240 RPPH1-201ENST00000516869 333 ntBASIC14.29□□□□□ -0.12
TRAV10A0A0B4J240 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC14.29□□□□□ -0.12
TRAV10A0A0B4J240 RNF121-214ENST00000533380 870 ntTSL 3 BASIC14.29□□□□□ -0.12
TRAV10A0A0B4J240 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV10A0A0B4J240 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV10A0A0B4J240 RN7SL471P-201ENST00000580476 299 ntBASIC14.29□□□□□ -0.12
TRAV10A0A0B4J240 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC14.29□□□□□ -0.12
TRAV10A0A0B4J240 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV10A0A0B4J240 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC14.29□□□□□ -0.12
TRAV10A0A0B4J240 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV10A0A0B4J240 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TRAV10A0A0B4J240 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV10A0A0B4J240 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV10A0A0B4J240 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
TRAV10A0A0B4J240 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
TRAV10A0A0B4J240 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV10A0A0B4J240 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TRAV10A0A0B4J240 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV10A0A0B4J240 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TRAV10A0A0B4J240 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TRAV10A0A0B4J240 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV10A0A0B4J240 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV10A0A0B4J240 MYB-221ENST00000527615 2381 ntTSL 5 BASIC14.29□□□□□ -0.12
TRAV10A0A0B4J240 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRAV10A0A0B4J240 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC14.28□□□□□ -0.12
TRAV10A0A0B4J240 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV10A0A0B4J240 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV10A0A0B4J240 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
TRAV10A0A0B4J240 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV10A0A0B4J240 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV10A0A0B4J240 PEX7-202ENST00000367756 680 ntTSL 3 BASIC14.28□□□□□ -0.12
TRAV10A0A0B4J240 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV10A0A0B4J240 MIR718-201ENST00000390190 70 ntBASIC14.28□□□□□ -0.12
TRAV10A0A0B4J240 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC14.28□□□□□ -0.12
TRAV10A0A0B4J240 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV10A0A0B4J240 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC14.28□□□□□ -0.12
TRAV10A0A0B4J240 RPS2P4-201ENST00000476944 856 ntBASIC14.28□□□□□ -0.12
TRAV10A0A0B4J240 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms