Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
TRBV5-3A0A0A0MS03 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TRBV5-3A0A0A0MS03 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV5-3A0A0A0MS03 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV5-3A0A0A0MS03 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV5-3A0A0A0MS03 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
TRBV5-3A0A0A0MS03 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.01■□□□□ 0.63
TRBV5-3A0A0A0MS03 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.01■□□□□ 0.63
TRBV5-3A0A0A0MS03 YBX1P1-201ENST00000445822 960 ntBASIC19.01■□□□□ 0.63
TRBV5-3A0A0A0MS03 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TRBV5-3A0A0A0MS03 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
TRBV5-3A0A0A0MS03 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV5-3A0A0A0MS03 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV5-3A0A0A0MS03 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.01■□□□□ 0.63
TRBV5-3A0A0A0MS03 TREX1-205ENST00000625293 1783 ntBASIC19.01■□□□□ 0.63
TRBV5-3A0A0A0MS03 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.01■□□□□ 0.63
TRBV5-3A0A0A0MS03 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19■□□□□ 0.63
TRBV5-3A0A0A0MS03 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TRBV5-3A0A0A0MS03 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
TRBV5-3A0A0A0MS03 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TRBV5-3A0A0A0MS03 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19■□□□□ 0.63
TRBV5-3A0A0A0MS03 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRBV5-3A0A0A0MS03 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19■□□□□ 0.63
TRBV5-3A0A0A0MS03 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19■□□□□ 0.63
TRBV5-3A0A0A0MS03 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19■□□□□ 0.63
TRBV5-3A0A0A0MS03 KRT18P61-201ENST00000585825 1298 ntBASIC19■□□□□ 0.63
TRBV5-3A0A0A0MS03 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
TRBV5-3A0A0A0MS03 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19■□□□□ 0.63
TRBV5-3A0A0A0MS03 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19■□□□□ 0.63
TRBV5-3A0A0A0MS03 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TRBV5-3A0A0A0MS03 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRBV5-3A0A0A0MS03 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRBV5-3A0A0A0MS03 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TRBV5-3A0A0A0MS03 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19■□□□□ 0.63
TRBV5-3A0A0A0MS03 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
TRBV5-3A0A0A0MS03 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRBV5-3A0A0A0MS03 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRBV5-3A0A0A0MS03 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TRBV5-3A0A0A0MS03 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
TRBV5-3A0A0A0MS03 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRBV5-3A0A0A0MS03 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19■□□□□ 0.63
TRBV5-3A0A0A0MS03 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19■□□□□ 0.63
TRBV5-3A0A0A0MS03 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRBV5-3A0A0A0MS03 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19■□□□□ 0.63
TRBV5-3A0A0A0MS03 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19■□□□□ 0.63
TRBV5-3A0A0A0MS03 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV5-3A0A0A0MS03 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV5-3A0A0A0MS03 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV5-3A0A0A0MS03 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV5-3A0A0A0MS03 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.99■□□□□ 0.63
TRBV5-3A0A0A0MS03 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TRBV5-3A0A0A0MS03 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV5-3A0A0A0MS03 KRT18P14-201ENST00000534205 1250 ntBASIC18.99■□□□□ 0.63
TRBV5-3A0A0A0MS03 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
TRBV5-3A0A0A0MS03 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.99■□□□□ 0.63
TRBV5-3A0A0A0MS03 AC018445.3-201ENST00000624177 1945 ntBASIC18.99■□□□□ 0.63
TRBV5-3A0A0A0MS03 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.99■□□□□ 0.63
TRBV5-3A0A0A0MS03 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV5-3A0A0A0MS03 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV5-3A0A0A0MS03 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.99■□□□□ 0.63
TRBV5-3A0A0A0MS03 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV5-3A0A0A0MS03 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV5-3A0A0A0MS03 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.98■□□□□ 0.63
TRBV5-3A0A0A0MS03 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.98■□□□□ 0.63
TRBV5-3A0A0A0MS03 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV5-3A0A0A0MS03 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TRBV5-3A0A0A0MS03 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV5-3A0A0A0MS03 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.98■□□□□ 0.63
TRBV5-3A0A0A0MS03 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.98■□□□□ 0.63
TRBV5-3A0A0A0MS03 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV5-3A0A0A0MS03 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV5-3A0A0A0MS03 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.98■□□□□ 0.63
TRBV5-3A0A0A0MS03 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV5-3A0A0A0MS03 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.98■□□□□ 0.63
TRBV5-3A0A0A0MS03 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
TRBV5-3A0A0A0MS03 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV5-3A0A0A0MS03 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV5-3A0A0A0MS03 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV5-3A0A0A0MS03 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV5-3A0A0A0MS03 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.98■□□□□ 0.63
TRBV5-3A0A0A0MS03 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
TRBV5-3A0A0A0MS03 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.98■□□□□ 0.63
TRBV5-3A0A0A0MS03 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
TRBV5-3A0A0A0MS03 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.98■□□□□ 0.63
TRBV5-3A0A0A0MS03 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TRBV5-3A0A0A0MS03 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV5-3A0A0A0MS03 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.98■□□□□ 0.63
TRBV5-3A0A0A0MS03 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.98■□□□□ 0.63
TRBV5-3A0A0A0MS03 AC087289.5-201ENST00000586076 3175 ntBASIC18.98■□□□□ 0.63
TRBV5-3A0A0A0MS03 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.98■□□□□ 0.63
TRBV5-3A0A0A0MS03 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV5-3A0A0A0MS03 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV5-3A0A0A0MS03 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.97■□□□□ 0.63
TRBV5-3A0A0A0MS03 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV5-3A0A0A0MS03 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV5-3A0A0A0MS03 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
TRBV5-3A0A0A0MS03 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV5-3A0A0A0MS03 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV5-3A0A0A0MS03 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.97■□□□□ 0.63
TRBV5-3A0A0A0MS03 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms