Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 CCDC14-203ENST00000409697 2962 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
UBE4BO95155 LINC02059-202ENST00000506471 2094 ntTSL 2 BASIC9.11□□□□□ -0.95
UBE4BO95155 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
UBE4BO95155 PLRG1-201ENST00000302078 1673 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
UBE4BO95155 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
UBE4BO95155 ZMYND8-201ENST00000262975 4139 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
UBE4BO95155 OR2A1-202ENST00000641044 4632 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
UBE4BO95155 SLC8A1-203ENST00000403092 3178 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
UBE4BO95155 PDZK1-202ENST00000417171 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
UBE4BO95155 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
UBE4BO95155 TRIM5-201ENST00000380027 2290 ntTSL 5 BASIC9.1□□□□□ -0.95
UBE4BO95155 AC120114.2-201ENST00000567795 2272 ntBASIC9.1□□□□□ -0.95
UBE4BO95155 IL26-201ENST00000229134 1075 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
UBE4BO95155 MYL6-201ENST00000293422 664 ntAPPRIS ALT1 TSL 2 BASIC9.1□□□□□ -0.95
UBE4BO95155 ARR3-202ENST00000374495 1298 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
UBE4BO95155 RNF212B-203ENST00000430154 903 ntAPPRIS P2 TSL 5 BASIC9.1□□□□□ -0.95
UBE4BO95155 RPL26P34-201ENST00000431005 451 ntBASIC9.1□□□□□ -0.95
UBE4BO95155 WDR82P1-201ENST00000439836 939 ntBASIC9.1□□□□□ -0.95
UBE4BO95155 SAP18P3-201ENST00000449663 396 ntBASIC9.1□□□□□ -0.95
UBE4BO95155 RN7SL215P-201ENST00000487718 298 ntBASIC9.1□□□□□ -0.95
UBE4BO95155 CCAR2-208ENST00000521301 337 ntTSL 3 BASIC9.1□□□□□ -0.95
UBE4BO95155 MYL6-207ENST00000547649 655 ntAPPRIS ALT1 TSL 1 (best) BASIC9.1□□□□□ -0.95
UBE4BO95155 AC117498.2-202ENST00000549864 473 ntTSL 2 BASIC9.1□□□□□ -0.95
UBE4BO95155 HIF1A-AS2-201ENST00000554254 533 ntTSL 3 BASIC9.1□□□□□ -0.95
UBE4BO95155 AC025198.1-201ENST00000578331 419 ntBASIC9.1□□□□□ -0.95
UBE4BO95155 JPT1-211ENST00000581874 517 ntTSL 5 BASIC9.1□□□□□ -0.95
UBE4BO95155 AC005180.1-201ENST00000591137 587 ntTSL 4 BASIC9.1□□□□□ -0.95
UBE4BO95155 AL121917.2-201ENST00000605044 390 ntBASIC9.1□□□□□ -0.95
UBE4BO95155 AL132821.1-201ENST00000616029 394 ntBASIC9.1□□□□□ -0.95
UBE4BO95155 AQP4-208ENST00000622234 891 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
UBE4BO95155 AL356095.2-201ENST00000624025 457 ntBASIC9.1□□□□□ -0.95
UBE4BO95155 MAGOHB-211ENST00000625272 319 ntTSL 3 BASIC9.1□□□□□ -0.95
UBE4BO95155 NELL1-201ENST00000298925 3329 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
UBE4BO95155 ZNF45-206ENST00000615985 2912 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
UBE4BO95155 FAM205BP-202ENST00000399773 4009 ntBASIC9.1□□□□□ -0.95
UBE4BO95155 UBQLN3-201ENST00000311659 2407 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
UBE4BO95155 PAFAH2-201ENST00000374282 3581 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
UBE4BO95155 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
UBE4BO95155 FCGR3B-209ENST00000614870 1993 ntTSL 5 BASIC9.1□□□□□ -0.95
UBE4BO95155 TMEM87A-202ENST00000389834 3109 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
UBE4BO95155 ZNF649-201ENST00000354957 3197 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
UBE4BO95155 IL1R1-208ENST00000424272 2658 ntTSL 5 BASIC9.1□□□□□ -0.95
UBE4BO95155 NOS1-202ENST00000338101 4462 ntTSL 5 BASIC9.1□□□□□ -0.95
UBE4BO95155 MASP1-205ENST00000392472 3900 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
UBE4BO95155 GART-201ENST00000361093 2149 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
UBE4BO95155 AC008543.1-201ENST00000344893 3383 ntTSL 2 BASIC9.1□□□□□ -0.95
UBE4BO95155 ZNF3-202ENST00000299667 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
UBE4BO95155 VAMP3-201ENST00000054666 2205 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
UBE4BO95155 SKIV2L2-201ENST00000230640 4192 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
UBE4BO95155 SNRPD1-201ENST00000300413 4909 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
UBE4BO95155 PIWIL4-201ENST00000299001 3199 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
UBE4BO95155 CDK15-202ENST00000410091 1780 ntAPPRIS P3 TSL 2 BASIC9.1□□□□□ -0.95
UBE4BO95155 PARP4-201ENST00000381989 5474 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
UBE4BO95155 ST5-237ENST00000530991 3396 ntTSL 2 BASIC9.1□□□□□ -0.95
UBE4BO95155 RUNX1T1-203ENST00000396218 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC9.09□□□□□ -0.95
UBE4BO95155 MPI-213ENST00000566377 2809 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
UBE4BO95155 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
UBE4BO95155 XRCC6P4-201ENST00000518193 2067 ntBASIC9.09□□□□□ -0.95
UBE4BO95155 CLIP1-218ENST00000545889 4633 ntTSL 5 BASIC9.09□□□□□ -0.95
UBE4BO95155 FXYD1-201ENST00000351325 592 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
UBE4BO95155 SNORA73A-201ENST00000364938 206 ntBASIC9.09□□□□□ -0.95
UBE4BO95155 CENPW-202ENST00000368326 443 ntTSL 2 BASIC9.09□□□□□ -0.95
UBE4BO95155 FAM107B-202ENST00000378458 1284 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
UBE4BO95155 MIR1184-2-201ENST00000408263 99 ntBASIC9.09□□□□□ -0.95
UBE4BO95155 MIR1184-1-201ENST00000408606 99 ntBASIC9.09□□□□□ -0.95
UBE4BO95155 MIR1184-3-201ENST00000408676 99 ntBASIC9.09□□□□□ -0.95
UBE4BO95155 AL603650.1-201ENST00000412680 240 ntBASIC9.09□□□□□ -0.95
UBE4BO95155 UQCRHP2-201ENST00000415651 288 ntBASIC9.09□□□□□ -0.95
UBE4BO95155 RPL7AP72-201ENST00000417266 768 ntBASIC9.09□□□□□ -0.95
UBE4BO95155 SPCS1-202ENST00000423431 822 ntTSL 3 BASIC9.09□□□□□ -0.95
UBE4BO95155 SLC8A1-AS1-204ENST00000427354 790 ntTSL 3 BASIC9.09□□□□□ -0.95
UBE4BO95155 AL117338.1-201ENST00000434552 631 ntTSL 5 BASIC9.09□□□□□ -0.95
UBE4BO95155 ASS1P5-201ENST00000435496 1239 ntBASIC9.09□□□□□ -0.95
UBE4BO95155 LSMEM1-202ENST00000439068 730 ntAPPRIS P1 TSL 3 BASIC9.09□□□□□ -0.95
UBE4BO95155 OR5S1P-201ENST00000453063 951 ntBASIC9.09□□□□□ -0.95
UBE4BO95155 PET100-201ENST00000456958 219 ntTSL 2 BASIC9.09□□□□□ -0.95
UBE4BO95155 AC100843.1-201ENST00000475372 550 ntBASIC9.09□□□□□ -0.95
UBE4BO95155 LINC02016-201ENST00000488425 927 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
UBE4BO95155 BX293995.1-201ENST00000502880 755 ntBASIC9.09□□□□□ -0.95
UBE4BO95155 SNRPCP8-201ENST00000514820 211 ntBASIC9.09□□□□□ -0.95
UBE4BO95155 AC060765.1-202ENST00000518367 257 ntTSL 3 BASIC9.09□□□□□ -0.95
UBE4BO95155 SLC22A10-203ENST00000526800 699 ntTSL 5 BASIC9.09□□□□□ -0.95
UBE4BO95155 AP005597.3-201ENST00000532369 799 ntBASIC9.09□□□□□ -0.95
UBE4BO95155 AL662884.1-201ENST00000559458 662 ntTSL 2 BASIC9.09□□□□□ -0.95
UBE4BO95155 AC139099.1-203ENST00000570366 607 ntTSL 3 BASIC9.09□□□□□ -0.95
UBE4BO95155 AC011444.4-201ENST00000586415 418 ntBASIC9.09□□□□□ -0.95
UBE4BO95155 AL354733.2-205ENST00000590813 621 ntTSL 5 BASIC9.09□□□□□ -0.95
UBE4BO95155 CD209-208ENST00000593821 807 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
UBE4BO95155 AC010323.2-201ENST00000596405 594 ntBASIC9.09□□□□□ -0.95
UBE4BO95155 AL691432.1-202ENST00000597891 502 ntBASIC9.09□□□□□ -0.95
UBE4BO95155 Metazoa_SRP.46-201ENST00000611137 251 ntBASIC9.09□□□□□ -0.95
UBE4BO95155 Metazoa_SRP.146-201ENST00000619409 286 ntBASIC9.09□□□□□ -0.95
UBE4BO95155 AL031772.1-216ENST00000619494 697 ntTSL 5 BASIC9.09□□□□□ -0.95
UBE4BO95155 STRADA-246ENST00000640397 1045 ntTSL 5 BASIC9.09□□□□□ -0.95
UBE4BO95155 LINC02312-201ENST00000555187 3046 ntTSL 2 BASIC9.09□□□□□ -0.95
UBE4BO95155 ALDOB-203ENST00000616752 1391 ntTSL 5 BASIC9.09□□□□□ -0.95
UBE4BO95155 SLC11A2-203ENST00000394904 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
UBE4BO95155 BRCA1-208ENST00000468300 3273 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
UBE4BO95155 CAP2-203ENST00000465994 1404 ntTSL 2 BASIC9.09□□□□□ -0.95
UBE4BO95155 PPARGC1A-206ENST00000507380 2385 ntTSL 2 BASIC9.09□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms