Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 LINC01358-207ENST00000634502 2575 ntTSL 5 BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 ZNF562-208ENST00000590155 1712 ntAPPRIS ALT2 TSL 2 BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 MCM3-205ENST00000596288 3169 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 MSL3-201ENST00000312196 2345 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 RBMS2-204ENST00000550726 1452 ntTSL 2 BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 HHLA1-202ENST00000434736 2369 ntAPPRIS P5 TSL 5 BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 SORBS1-204ENST00000361941 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 DZANK1-204ENST00000358866 3310 ntAPPRIS P2 TSL 5 BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 CHODL-206ENST00000400135 2136 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 CHI3L2-204ENST00000466741 1518 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 TTC39A-212ENST00000447632 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 PPARG-201ENST00000287820 1850 ntAPPRIS P4 TSL 1 (best) BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 RGS20-207ENST00000522225 1559 ntTSL 2 BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 SERPINB9-201ENST00000380698 4118 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 SMR3A-201ENST00000226460 665 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 OR11G2-201ENST00000357366 1038 ntBASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 TDGF1P4-201ENST00000401555 520 ntBASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 AL034372.1-201ENST00000407586 754 ntBASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 AL122008.2-201ENST00000412915 570 ntBASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 AC003075.1-208ENST00000415246 596 ntTSL 3 BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 AL513302.1-201ENST00000415679 428 ntBASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 AKR1B1P8-201ENST00000418396 936 ntBASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 AC006457.1-201ENST00000420733 392 ntBASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 LINC00444-201ENST00000435617 215 ntTSL 5 BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 RPSAP76-201ENST00000444599 853 ntBASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 OR7E109P-201ENST00000445529 855 ntBASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 AC003075.1-206ENST00000448664 541 ntTSL 3 BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 OR7E102P-201ENST00000448855 1015 ntBASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 AC023590.1-203ENST00000449065 411 ntTSL 3 BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 MARK2P14-201ENST00000449657 628 ntBASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 SETP4-201ENST00000455717 868 ntBASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 RN7SL854P-201ENST00000459767 295 ntBASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 GCSAM-202ENST00000460387 623 ntTSL 3 BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 RN7SL621P-201ENST00000472565 299 ntBASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 ADAM3A-206ENST00000484602 1046 ntTSL 2 BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 ENPP7P10-201ENST00000504828 933 ntBASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 AC104063.1-201ENST00000504840 702 ntTSL 3 BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 GNGT2-205ENST00000511673 500 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 C5orf58-202ENST00000517575 718 ntAPPRIS ALT2 TSL 3 BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 PSAT1P1-201ENST00000518968 1106 ntBASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 NACA2-201ENST00000521764 777 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 ANKS1B-205ENST00000546568 1281 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 ULK4P3-201ENST00000563895 440 ntBASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 AC004224.2-201ENST00000574423 529 ntTSL 5 BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 CFAP52-208ENST00000576499 711 ntTSL 3 BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 AF001548.1-201ENST00000577048 550 ntTSL 4 BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 AC105243.1-202ENST00000583942 847 ntTSL 3 BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 ZNF493-205ENST00000596302 546 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 MIR6751-201ENST00000610479 63 ntBASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 AC239803.3-201ENST00000614663 494 ntTSL 3 BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 AC093495.1-212ENST00000630173 1162 ntTSL 5 BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 AC073488.11-201ENST00000633298 754 ntBASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 AL356289.1-201ENST00000635446 743 ntTSL 3 BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 KCNJ10-204ENST00000637644 1239 ntTSL 5 BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 LINC00682-204ENST00000637677 931 ntTSL 5 BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 LINC01695-203ENST00000453420 4486 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 AKT3-203ENST00000366539 5127 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 TUBA1A-202ENST00000301071 1915 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 LANCL1-201ENST00000233714 1647 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 NAALAD2-204ENST00000525171 1613 ntTSL 2 BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 AC092329.4-202ENST00000638174 1989 ntTSL 2 BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 TMEM43-201ENST00000306077 3341 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 ATP5E-201ENST00000243997 3665 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 GOSR2-215ENST00000638374 2683 ntTSL 5 BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 ERCC8-201ENST00000265038 2017 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 AC135731.2-201ENST00000603029 2098 ntBASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 PTGS2-201ENST00000367468 4514 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 SRI-204ENST00000431660 1418 ntTSL 2 BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 ZNF185-203ENST00000324823 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 C16orf62-205ENST00000513947 2501 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
NPIPA3F8WFD2 KIAA0753-201ENST00000361413 4859 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 ADGRF4-203ENST00000371220 3075 ntTSL 5 BASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 DCN-220ENST00000552962 1930 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 TBC1D5-209ENST00000429383 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 PACRG-201ENST00000337019 1619 ntTSL 2 BASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 NEDD4L-214ENST00000586263 3347 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 PHLDB2-207ENST00000477695 5813 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 CCDC162P-202ENST00000368966 6751 ntBASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 FABP5-201ENST00000297258 851 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 RNA5SP141-201ENST00000364543 120 ntBASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 VTRNA1-2-201ENST00000365241 89 ntBASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 SNORA73.3-201ENST00000410213 189 ntBASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 PPIAP2-201ENST00000414143 492 ntBASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 TGFB2-AS1-201ENST00000414452 557 ntTSL 3 BASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 RPS14P4-201ENST00000415880 418 ntBASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 AC007422.2-201ENST00000419809 167 ntTSL 3 BASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 AC073367.1-201ENST00000421480 697 ntTSL 2 BASIC7.68□□□□□ -1.18
NPIPA3F8WFD2 RPL12P19-201ENST00000429825 486 ntBASIC7.68□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms