Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 DOCK1-206ENST00000623213 5761 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
LMO3Q8TAP4 FBXO36-201ENST00000283946 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
LMO3Q8TAP4 MFAP3L-202ENST00000393702 1505 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
LMO3Q8TAP4 FMO9P-202ENST00000488458 1535 ntBASIC8.85□□□□□ -0.99
LMO3Q8TAP4 LRP4-AS1-201ENST00000502049 1504 ntTSL 2 BASIC8.85□□□□□ -0.99
LMO3Q8TAP4 MSL3-201ENST00000312196 2345 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
LMO3Q8TAP4 ZNF415-214ENST00000597748 2461 ntTSL 5 BASIC8.85□□□□□ -0.99
LMO3Q8TAP4 SMARCA2-263ENST00000637806 7061 ntTSL 5 BASIC8.84□□□□□ -0.99
LMO3Q8TAP4 ZEB2-210ENST00000440875 1809 ntTSL 5 BASIC8.84□□□□□ -0.99
LMO3Q8TAP4 RECQL5-203ENST00000420326 3710 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
LMO3Q8TAP4 CCDC162P-214ENST00000640755 1958 ntTSL 5 BASIC8.84□□□□□ -0.99
LMO3Q8TAP4 LRRC37A-202ENST00000393465 4997 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
LMO3Q8TAP4 MSL3-203ENST00000361672 2256 ntTSL 2 BASIC8.84□□□□□ -0.99
LMO3Q8TAP4 ABLIM1-206ENST00000392952 6841 ntTSL 5 BASIC8.84□□□□□ -0.99
LMO3Q8TAP4 BCL6-201ENST00000232014 2710 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LMO3Q8TAP4 SLMAP-203ENST00000383718 6749 ntTSL 2 BASIC8.84□□□□□ -0.99
LMO3Q8TAP4 FHL1-206ENST00000394153 2374 ntTSL 5 BASIC8.84□□□□□ -0.99
LMO3Q8TAP4 USP14-201ENST00000261601 4921 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LMO3Q8TAP4 MYPN-205ENST00000613327 6116 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
LMO3Q8TAP4 IGBP1-AS1-201ENST00000366397 542 ntTSL 5 BASIC8.84□□□□□ -0.99
LMO3Q8TAP4 SPRR1A-201ENST00000368762 270 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
LMO3Q8TAP4 ZNF738-202ENST00000380870 1142 ntAPPRIS ALT2 TSL 2 BASIC8.84□□□□□ -0.99
LMO3Q8TAP4 SEMA5A-201ENST00000382496 11762 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LMO3Q8TAP4 ZNF200-201ENST00000396868 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
LMO3Q8TAP4 AC074254.1-201ENST00000399152 404 ntTSL 5 BASIC8.84□□□□□ -0.99
LMO3Q8TAP4 AC008063.1-201ENST00000418335 640 ntTSL 3 BASIC8.84□□□□□ -0.99
LMO3Q8TAP4 FKBP1AP3-201ENST00000423650 319 ntBASIC8.84□□□□□ -0.99
LMO3Q8TAP4 LINC01468-202ENST00000435813 975 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
LMO3Q8TAP4 OR5S1P-201ENST00000453063 951 ntBASIC8.84□□□□□ -0.99
LMO3Q8TAP4 SOCS5P4-201ENST00000454743 1566 ntBASIC8.84□□□□□ -0.99
LMO3Q8TAP4 PCBP1-AS1-243ENST00000458698 1893 ntTSL 3 BASIC8.84□□□□□ -0.99
LMO3Q8TAP4 RN7SL520P-201ENST00000474110 286 ntBASIC8.84□□□□□ -0.99
LMO3Q8TAP4 AC008481.2-201ENST00000483614 531 ntBASIC8.84□□□□□ -0.99
LMO3Q8TAP4 AC027338.2-201ENST00000504382 526 ntBASIC8.84□□□□□ -0.99
LMO3Q8TAP4 PGAM1P8-201ENST00000526979 453 ntBASIC8.84□□□□□ -0.99
LMO3Q8TAP4 AC078886.1-201ENST00000549144 554 ntBASIC8.84□□□□□ -0.99
LMO3Q8TAP4 AC079598.4-201ENST00000549647 265 ntBASIC8.84□□□□□ -0.99
LMO3Q8TAP4 SRSF5-206ENST00000554021 567 ntTSL 4 BASIC8.84□□□□□ -0.99
LMO3Q8TAP4 AC009779.4-201ENST00000554248 611 ntBASIC8.84□□□□□ -0.99
LMO3Q8TAP4 PECAM1-203ENST00000563924 6831 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LMO3Q8TAP4 AC009121.2-201ENST00000572913 714 ntTSL 3 BASIC8.84□□□□□ -0.99
LMO3Q8TAP4 MIR4314-201ENST00000583321 92 ntBASIC8.84□□□□□ -0.99
LMO3Q8TAP4 SRD5A3-AS1-212ENST00000601433 754 ntTSL 5 BASIC8.84□□□□□ -0.99
LMO3Q8TAP4 OR10AE1P-201ENST00000606962 1029 ntBASIC8.84□□□□□ -0.99
LMO3Q8TAP4 AL139220.2-217ENST00000609027 940 ntTSL 5 BASIC8.84□□□□□ -0.99
LMO3Q8TAP4 GPC6-202ENST00000617456 792 ntTSL 3 BASIC8.84□□□□□ -0.99
LMO3Q8TAP4 AC048380.3-201ENST00000623145 796 ntBASIC8.84□□□□□ -0.99
LMO3Q8TAP4 IYD-201ENST00000229447 7513 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
LMO3Q8TAP4 WDR19-201ENST00000399820 4520 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LMO3Q8TAP4 CFAP47-201ENST00000297866 3608 ntTSL 2 BASIC8.84□□□□□ -0.99
LMO3Q8TAP4 ZNF791-202ENST00000446165 6412 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
LMO3Q8TAP4 SLC8A1-203ENST00000403092 3178 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LMO3Q8TAP4 TMEM167A-201ENST00000502346 4630 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LMO3Q8TAP4 LINC00662-203ENST00000586954 2254 ntTSL 2 BASIC8.84□□□□□ -0.99
LMO3Q8TAP4 RPEL1-201ENST00000441178 2130 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
LMO3Q8TAP4 GPR156-201ENST00000315843 4193 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
LMO3Q8TAP4 PHYHIPL-202ENST00000373880 3578 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LMO3Q8TAP4 PAN2-221ENST00000610546 5301 ntAPPRIS ALT1 TSL 5 BASIC8.84□□□□□ -0.99
LMO3Q8TAP4 RAD51B-211ENST00000487861 1673 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
LMO3Q8TAP4 PARP15-201ENST00000310366 1518 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
LMO3Q8TAP4 CEACAMP3-201ENST00000473762 1548 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
LMO3Q8TAP4 DDX10-203ENST00000526794 6707 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
LMO3Q8TAP4 AC145207.5-201ENST00000582866 2682 ntBASIC8.84□□□□□ -0.99
LMO3Q8TAP4 PITRM1-AS1-201ENST00000430356 3998 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
LMO3Q8TAP4 DNAJC27-AS1-205ENST00000434897 4660 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
LMO3Q8TAP4 LUARIS-201ENST00000436105 2916 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
LMO3Q8TAP4 RPS17-209ENST00000561157 1909 ntTSL 2 BASIC8.84□□□□□ -1
LMO3Q8TAP4 AC008467.1-201ENST00000512693 5471 ntTSL 1 (best) BASIC8.84□□□□□ -1
LMO3Q8TAP4 DNAH11-212ENST00000620169 13670 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -1
LMO3Q8TAP4 REG4-203ENST00000369401 2327 ntTSL 1 (best) BASIC8.83□□□□□ -1
LMO3Q8TAP4 ZNF512-203ENST00000413371 3703 ntTSL 2 BASIC8.83□□□□□ -1
LMO3Q8TAP4 OLFM5P-201ENST00000411807 1478 ntBASIC8.83□□□□□ -1
LMO3Q8TAP4 TCF4-203ENST00000398339 2551 ntTSL 1 (best) BASIC8.83□□□□□ -1
LMO3Q8TAP4 DAPP1-201ENST00000296414 2955 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
LMO3Q8TAP4 NEDD1-201ENST00000266742 4046 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
LMO3Q8TAP4 PARP2-204ENST00000527915 1980 ntTSL 2 BASIC8.83□□□□□ -1
LMO3Q8TAP4 SLC7A6-201ENST00000219343 6251 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LMO3Q8TAP4 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC8.83□□□□□ -1
LMO3Q8TAP4 SVBP-201ENST00000372521 658 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LMO3Q8TAP4 FCAR-205ENST00000391723 754 ntTSL 1 (best) BASIC8.83□□□□□ -1
LMO3Q8TAP4 PROX1-AS1-201ENST00000413560 496 ntTSL 5 BASIC8.83□□□□□ -1
LMO3Q8TAP4 AC013467.1-201ENST00000430717 1041 ntBASIC8.83□□□□□ -1
LMO3Q8TAP4 RPL21P88-201ENST00000436649 436 ntBASIC8.83□□□□□ -1
LMO3Q8TAP4 AC091808.1-201ENST00000438867 786 ntTSL 3 BASIC8.83□□□□□ -1
LMO3Q8TAP4 RPL37A-204ENST00000441179 529 ntTSL 5 BASIC8.83□□□□□ -1
LMO3Q8TAP4 SFTPA3P-201ENST00000446429 367 ntBASIC8.83□□□□□ -1
LMO3Q8TAP4 AC005840.2-201ENST00000447193 355 ntBASIC8.83□□□□□ -1
LMO3Q8TAP4 DAZAP2P1-201ENST00000475212 503 ntBASIC8.83□□□□□ -1
LMO3Q8TAP4 CAMTA1-210ENST00000476864 714 ntTSL 1 (best) BASIC8.83□□□□□ -1
LMO3Q8TAP4 AC068042.1-201ENST00000482222 1148 ntBASIC8.83□□□□□ -1
LMO3Q8TAP4 AC114400.1-201ENST00000487624 681 ntTSL 3 BASIC8.83□□□□□ -1
LMO3Q8TAP4 RN7SL464P-201ENST00000492743 297 ntBASIC8.83□□□□□ -1
LMO3Q8TAP4 BX293995.1-201ENST00000502880 755 ntBASIC8.83□□□□□ -1
LMO3Q8TAP4 GSTO3P-201ENST00000504733 718 ntBASIC8.83□□□□□ -1
LMO3Q8TAP4 AC079795.1-201ENST00000508847 358 ntTSL 3 BASIC8.83□□□□□ -1
LMO3Q8TAP4 RN7SKP190-201ENST00000516079 286 ntBASIC8.83□□□□□ -1
LMO3Q8TAP4 HDAC2-AS2-211ENST00000520034 790 ntTSL 3 BASIC8.83□□□□□ -1
LMO3Q8TAP4 AC087521.3-201ENST00000528226 553 ntTSL 4 BASIC8.83□□□□□ -1
LMO3Q8TAP4 AP002991.1-201ENST00000539305 574 ntTSL 4 BASIC8.83□□□□□ -1
LMO3Q8TAP4 AL662884.1-201ENST00000559458 662 ntTSL 2 BASIC8.83□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms