Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
DNMT3AQ9Y6K1 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.92■□□□□ 0.78
DNMT3AQ9Y6K1 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
DNMT3AQ9Y6K1 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DNMT3AQ9Y6K1 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.91■□□□□ 0.78
DNMT3AQ9Y6K1 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DNMT3AQ9Y6K1 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
DNMT3AQ9Y6K1 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
DNMT3AQ9Y6K1 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.91■□□□□ 0.78
DNMT3AQ9Y6K1 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DNMT3AQ9Y6K1 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
DNMT3AQ9Y6K1 FP700111.2-201ENST00000619190 1892 ntBASIC19.91■□□□□ 0.78
DNMT3AQ9Y6K1 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DNMT3AQ9Y6K1 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
DNMT3AQ9Y6K1 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.91■□□□□ 0.78
DNMT3AQ9Y6K1 HLA-B-256ENST00000639848 1089 ntBASIC19.91■□□□□ 0.78
DNMT3AQ9Y6K1 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
DNMT3AQ9Y6K1 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DNMT3AQ9Y6K1 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.91■□□□□ 0.78
DNMT3AQ9Y6K1 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.91■□□□□ 0.78
DNMT3AQ9Y6K1 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.91■□□□□ 0.78
DNMT3AQ9Y6K1 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DNMT3AQ9Y6K1 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
DNMT3AQ9Y6K1 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DNMT3AQ9Y6K1 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
DNMT3AQ9Y6K1 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DNMT3AQ9Y6K1 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
DNMT3AQ9Y6K1 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
DNMT3AQ9Y6K1 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DNMT3AQ9Y6K1 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.91■□□□□ 0.78
DNMT3AQ9Y6K1 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DNMT3AQ9Y6K1 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.9■□□□□ 0.78
DNMT3AQ9Y6K1 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DNMT3AQ9Y6K1 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.9■□□□□ 0.78
DNMT3AQ9Y6K1 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
DNMT3AQ9Y6K1 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.9■□□□□ 0.78
DNMT3AQ9Y6K1 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.9■□□□□ 0.78
DNMT3AQ9Y6K1 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DNMT3AQ9Y6K1 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
DNMT3AQ9Y6K1 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.9■□□□□ 0.78
DNMT3AQ9Y6K1 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
DNMT3AQ9Y6K1 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
DNMT3AQ9Y6K1 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
DNMT3AQ9Y6K1 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
DNMT3AQ9Y6K1 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
DNMT3AQ9Y6K1 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
DNMT3AQ9Y6K1 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.9■□□□□ 0.78
DNMT3AQ9Y6K1 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
DNMT3AQ9Y6K1 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DNMT3AQ9Y6K1 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
DNMT3AQ9Y6K1 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.89■□□□□ 0.77
DNMT3AQ9Y6K1 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
DNMT3AQ9Y6K1 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.89■□□□□ 0.77
DNMT3AQ9Y6K1 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
DNMT3AQ9Y6K1 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.89■□□□□ 0.77
DNMT3AQ9Y6K1 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.89■□□□□ 0.77
DNMT3AQ9Y6K1 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.89■□□□□ 0.77
DNMT3AQ9Y6K1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
DNMT3AQ9Y6K1 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.89■□□□□ 0.77
DNMT3AQ9Y6K1 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DNMT3AQ9Y6K1 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
DNMT3AQ9Y6K1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DNMT3AQ9Y6K1 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DNMT3AQ9Y6K1 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.88■□□□□ 0.77
DNMT3AQ9Y6K1 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DNMT3AQ9Y6K1 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
DNMT3AQ9Y6K1 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.88■□□□□ 0.77
DNMT3AQ9Y6K1 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
DNMT3AQ9Y6K1 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
DNMT3AQ9Y6K1 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
DNMT3AQ9Y6K1 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
DNMT3AQ9Y6K1 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DNMT3AQ9Y6K1 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DNMT3AQ9Y6K1 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DNMT3AQ9Y6K1 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
DNMT3AQ9Y6K1 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.88■□□□□ 0.77
DNMT3AQ9Y6K1 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.88■□□□□ 0.77
DNMT3AQ9Y6K1 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DNMT3AQ9Y6K1 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.88■□□□□ 0.77
DNMT3AQ9Y6K1 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
DNMT3AQ9Y6K1 AC060766.5-201ENST00000590539 871 ntBASIC19.88■□□□□ 0.77
DNMT3AQ9Y6K1 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DNMT3AQ9Y6K1 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.88■□□□□ 0.77
DNMT3AQ9Y6K1 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DNMT3AQ9Y6K1 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DNMT3AQ9Y6K1 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DNMT3AQ9Y6K1 AL121603.2-201ENST00000557373 2117 ntBASIC19.87■□□□□ 0.77
DNMT3AQ9Y6K1 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DNMT3AQ9Y6K1 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
DNMT3AQ9Y6K1 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DNMT3AQ9Y6K1 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
DNMT3AQ9Y6K1 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
DNMT3AQ9Y6K1 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.87■□□□□ 0.77
DNMT3AQ9Y6K1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.87■□□□□ 0.77
DNMT3AQ9Y6K1 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
DNMT3AQ9Y6K1 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
DNMT3AQ9Y6K1 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.86■□□□□ 0.77
DNMT3AQ9Y6K1 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
DNMT3AQ9Y6K1 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.86■□□□□ 0.77
DNMT3AQ9Y6K1 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms