Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
PCDHA4Q9UN74 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC23.26■■□□□ 1.31
PCDHA4Q9UN74 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHA4Q9UN74 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC23.26■■□□□ 1.31
PCDHA4Q9UN74 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC23.26■■□□□ 1.31
PCDHA4Q9UN74 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC23.26■■□□□ 1.31
PCDHA4Q9UN74 AL138781.1-201ENST00000566567 1274 ntBASIC23.26■■□□□ 1.31
PCDHA4Q9UN74 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC23.26■■□□□ 1.31
PCDHA4Q9UN74 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHA4Q9UN74 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC23.26■■□□□ 1.31
PCDHA4Q9UN74 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
PCDHA4Q9UN74 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHA4Q9UN74 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHA4Q9UN74 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHA4Q9UN74 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC23.26■■□□□ 1.31
PCDHA4Q9UN74 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHA4Q9UN74 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHA4Q9UN74 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHA4Q9UN74 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHA4Q9UN74 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC23.25■■□□□ 1.31
PCDHA4Q9UN74 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHA4Q9UN74 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHA4Q9UN74 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC23.25■■□□□ 1.31
PCDHA4Q9UN74 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC23.25■■□□□ 1.31
PCDHA4Q9UN74 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC23.25■■□□□ 1.31
PCDHA4Q9UN74 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC23.25■■□□□ 1.31
PCDHA4Q9UN74 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHA4Q9UN74 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHA4Q9UN74 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
PCDHA4Q9UN74 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC23.25■■□□□ 1.31
PCDHA4Q9UN74 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC23.25■■□□□ 1.31
PCDHA4Q9UN74 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHA4Q9UN74 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHA4Q9UN74 LINC01006-201ENST00000333319 2292 ntBASIC23.24■■□□□ 1.31
PCDHA4Q9UN74 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHA4Q9UN74 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHA4Q9UN74 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHA4Q9UN74 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC23.24■■□□□ 1.31
PCDHA4Q9UN74 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHA4Q9UN74 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHA4Q9UN74 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
PCDHA4Q9UN74 AC092667.1-201ENST00000434301 2586 ntBASIC23.24■■□□□ 1.31
PCDHA4Q9UN74 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC23.24■■□□□ 1.31
PCDHA4Q9UN74 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHA4Q9UN74 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHA4Q9UN74 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC23.23■■□□□ 1.31
PCDHA4Q9UN74 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHA4Q9UN74 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC23.23■■□□□ 1.31
PCDHA4Q9UN74 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHA4Q9UN74 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHA4Q9UN74 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC23.23■■□□□ 1.31
PCDHA4Q9UN74 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC23.23■■□□□ 1.31
PCDHA4Q9UN74 AC142086.2-201ENST00000569753 217 ntBASIC23.23■■□□□ 1.31
PCDHA4Q9UN74 MIR4758-201ENST00000577688 71 ntBASIC23.23■■□□□ 1.31
PCDHA4Q9UN74 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC23.23■■□□□ 1.31
PCDHA4Q9UN74 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC23.23■■□□□ 1.31
PCDHA4Q9UN74 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
PCDHA4Q9UN74 DET1-207ENST00000564406 2315 ntTSL 2 BASIC23.23■■□□□ 1.31
PCDHA4Q9UN74 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC23.23■■□□□ 1.31
PCDHA4Q9UN74 NXN-202ENST00000537628 1340 ntTSL 3 BASIC23.23■■□□□ 1.31
PCDHA4Q9UN74 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHA4Q9UN74 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC23.23■■□□□ 1.31
PCDHA4Q9UN74 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHA4Q9UN74 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHA4Q9UN74 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHA4Q9UN74 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC23.23■■□□□ 1.31
PCDHA4Q9UN74 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC23.23■■□□□ 1.31
PCDHA4Q9UN74 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC23.22■■□□□ 1.31
PCDHA4Q9UN74 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHA4Q9UN74 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHA4Q9UN74 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC23.22■■□□□ 1.31
PCDHA4Q9UN74 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
PCDHA4Q9UN74 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC23.22■■□□□ 1.31
PCDHA4Q9UN74 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
PCDHA4Q9UN74 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
PCDHA4Q9UN74 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
PCDHA4Q9UN74 SERPINH1P1-201ENST00000419794 1249 ntBASIC23.22■■□□□ 1.31
PCDHA4Q9UN74 PPP1R14BP2-201ENST00000426284 444 ntBASIC23.22■■□□□ 1.31
PCDHA4Q9UN74 OR2A1-AS1-201ENST00000462305 773 ntBASIC23.22■■□□□ 1.31
PCDHA4Q9UN74 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC23.22■■□□□ 1.31
PCDHA4Q9UN74 C2orf69P4-201ENST00000565394 541 ntBASIC23.22■■□□□ 1.31
PCDHA4Q9UN74 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC23.22■■□□□ 1.31
PCDHA4Q9UN74 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC23.22■■□□□ 1.31
PCDHA4Q9UN74 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC23.22■■□□□ 1.31
PCDHA4Q9UN74 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHA4Q9UN74 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHA4Q9UN74 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHA4Q9UN74 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHA4Q9UN74 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHA4Q9UN74 DUSP5P2-201ENST00000426873 1033 ntBASIC23.21■■□□□ 1.31
PCDHA4Q9UN74 HES2-205ENST00000487437 968 ntTSL 3 BASIC23.21■■□□□ 1.31
PCDHA4Q9UN74 AC098934.4-201ENST00000564127 592 ntBASIC23.21■■□□□ 1.31
PCDHA4Q9UN74 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHA4Q9UN74 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC23.21■■□□□ 1.31
PCDHA4Q9UN74 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
PCDHA4Q9UN74 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC23.21■■□□□ 1.31
PCDHA4Q9UN74 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC23.21■■□□□ 1.31
PCDHA4Q9UN74 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
PCDHA4Q9UN74 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHA4Q9UN74 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms