Protein–RNA interactions for Protein: Q9UJ68

MSRA, Mitochondrial peptide methionine sulfoxide reductase, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSRAQ9UJ68 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
MSRAQ9UJ68 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MSRAQ9UJ68 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MSRAQ9UJ68 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.78■■□□□ 1.08
MSRAQ9UJ68 AC116562.2-201ENST00000507042 360 ntBASIC21.78■■□□□ 1.08
MSRAQ9UJ68 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.78■■□□□ 1.08
MSRAQ9UJ68 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.78■■□□□ 1.08
MSRAQ9UJ68 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.78■■□□□ 1.08
MSRAQ9UJ68 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
MSRAQ9UJ68 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC21.78■■□□□ 1.08
MSRAQ9UJ68 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.78■■□□□ 1.08
MSRAQ9UJ68 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MSRAQ9UJ68 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MSRAQ9UJ68 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
MSRAQ9UJ68 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
MSRAQ9UJ68 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MSRAQ9UJ68 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MSRAQ9UJ68 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MSRAQ9UJ68 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.77■■□□□ 1.08
MSRAQ9UJ68 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
MSRAQ9UJ68 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.77■■□□□ 1.08
MSRAQ9UJ68 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
MSRAQ9UJ68 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.77■■□□□ 1.08
MSRAQ9UJ68 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.77■■□□□ 1.08
MSRAQ9UJ68 AC091076.1-201ENST00000610741 619 ntBASIC21.77■■□□□ 1.08
MSRAQ9UJ68 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC21.77■■□□□ 1.08
MSRAQ9UJ68 AL121906.2-201ENST00000621597 723 ntBASIC21.77■■□□□ 1.08
MSRAQ9UJ68 CR392000.1-201ENST00000624770 1228 ntBASIC21.77■■□□□ 1.08
MSRAQ9UJ68 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
MSRAQ9UJ68 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
MSRAQ9UJ68 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.77■■□□□ 1.07
MSRAQ9UJ68 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.77■■□□□ 1.07
MSRAQ9UJ68 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
MSRAQ9UJ68 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.76■■□□□ 1.07
MSRAQ9UJ68 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.76■■□□□ 1.07
MSRAQ9UJ68 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.76■■□□□ 1.07
MSRAQ9UJ68 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC21.76■■□□□ 1.07
MSRAQ9UJ68 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
MSRAQ9UJ68 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MSRAQ9UJ68 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MSRAQ9UJ68 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.76■■□□□ 1.07
MSRAQ9UJ68 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.76■■□□□ 1.07
MSRAQ9UJ68 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MSRAQ9UJ68 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MSRAQ9UJ68 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MSRAQ9UJ68 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MSRAQ9UJ68 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
MSRAQ9UJ68 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
MSRAQ9UJ68 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MSRAQ9UJ68 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC21.75■■□□□ 1.07
MSRAQ9UJ68 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MSRAQ9UJ68 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC21.75■■□□□ 1.07
MSRAQ9UJ68 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.75■■□□□ 1.07
MSRAQ9UJ68 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.75■■□□□ 1.07
MSRAQ9UJ68 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC21.75■■□□□ 1.07
MSRAQ9UJ68 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.75■■□□□ 1.07
MSRAQ9UJ68 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
MSRAQ9UJ68 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MSRAQ9UJ68 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
MSRAQ9UJ68 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MSRAQ9UJ68 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
MSRAQ9UJ68 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
MSRAQ9UJ68 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MSRAQ9UJ68 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.74■■□□□ 1.07
MSRAQ9UJ68 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MSRAQ9UJ68 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
MSRAQ9UJ68 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MSRAQ9UJ68 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC21.74■■□□□ 1.07
MSRAQ9UJ68 TPM4P1-201ENST00000436100 807 ntBASIC21.74■■□□□ 1.07
MSRAQ9UJ68 KSR1P1-201ENST00000446298 240 ntBASIC21.74■■□□□ 1.07
MSRAQ9UJ68 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MSRAQ9UJ68 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MSRAQ9UJ68 AC010203.1-204ENST00000548782 407 ntBASIC21.74■■□□□ 1.07
MSRAQ9UJ68 LINC01238-205ENST00000567549 1107 ntBASIC21.74■■□□□ 1.07
MSRAQ9UJ68 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
MSRAQ9UJ68 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
MSRAQ9UJ68 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
MSRAQ9UJ68 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.74■■□□□ 1.07
MSRAQ9UJ68 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
MSRAQ9UJ68 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.73■■□□□ 1.07
MSRAQ9UJ68 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
MSRAQ9UJ68 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.73■■□□□ 1.07
MSRAQ9UJ68 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.73■■□□□ 1.07
MSRAQ9UJ68 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
MSRAQ9UJ68 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
MSRAQ9UJ68 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
MSRAQ9UJ68 AC124283.5-201ENST00000624661 1809 ntBASIC21.73■■□□□ 1.07
MSRAQ9UJ68 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MSRAQ9UJ68 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
MSRAQ9UJ68 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MSRAQ9UJ68 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC21.72■■□□□ 1.07
MSRAQ9UJ68 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
MSRAQ9UJ68 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
MSRAQ9UJ68 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
MSRAQ9UJ68 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC21.72■■□□□ 1.07
MSRAQ9UJ68 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.72■■□□□ 1.07
MSRAQ9UJ68 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
MSRAQ9UJ68 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
MSRAQ9UJ68 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
MSRAQ9UJ68 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms