Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.28■□□□□ 0.68
CCM2LQ9NUG4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCM2LQ9NUG4 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.28■□□□□ 0.68
CCM2LQ9NUG4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCM2LQ9NUG4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.28■□□□□ 0.68
CCM2LQ9NUG4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCM2LQ9NUG4 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCM2LQ9NUG4 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.28■□□□□ 0.68
CCM2LQ9NUG4 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CCM2LQ9NUG4 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCM2LQ9NUG4 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCM2LQ9NUG4 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCM2LQ9NUG4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCM2LQ9NUG4 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCM2LQ9NUG4 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CCM2LQ9NUG4 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCM2LQ9NUG4 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CCM2LQ9NUG4 AL158211.5-201ENST00000623583 2518 ntBASIC19.27■□□□□ 0.68
CCM2LQ9NUG4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCM2LQ9NUG4 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.27■□□□□ 0.68
CCM2LQ9NUG4 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCM2LQ9NUG4 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCM2LQ9NUG4 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.27■□□□□ 0.68
CCM2LQ9NUG4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCM2LQ9NUG4 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCM2LQ9NUG4 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.27■□□□□ 0.68
CCM2LQ9NUG4 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.27■□□□□ 0.68
CCM2LQ9NUG4 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCM2LQ9NUG4 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCM2LQ9NUG4 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.27■□□□□ 0.68
CCM2LQ9NUG4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCM2LQ9NUG4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.27■□□□□ 0.68
CCM2LQ9NUG4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.27■□□□□ 0.68
CCM2LQ9NUG4 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCM2LQ9NUG4 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.27■□□□□ 0.68
CCM2LQ9NUG4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CCM2LQ9NUG4 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.27■□□□□ 0.67
CCM2LQ9NUG4 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCM2LQ9NUG4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.26■□□□□ 0.67
CCM2LQ9NUG4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCM2LQ9NUG4 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCM2LQ9NUG4 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCM2LQ9NUG4 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CCM2LQ9NUG4 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCM2LQ9NUG4 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.26■□□□□ 0.67
CCM2LQ9NUG4 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.26■□□□□ 0.67
CCM2LQ9NUG4 SMUG1P1-201ENST00000590640 811 ntBASIC19.26■□□□□ 0.67
CCM2LQ9NUG4 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCM2LQ9NUG4 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCM2LQ9NUG4 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.26■□□□□ 0.67
CCM2LQ9NUG4 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCM2LQ9NUG4 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.26■□□□□ 0.67
CCM2LQ9NUG4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCM2LQ9NUG4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CCM2LQ9NUG4 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCM2LQ9NUG4 AP000974.1-201ENST00000623909 2387 ntBASIC19.26■□□□□ 0.67
CCM2LQ9NUG4 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCM2LQ9NUG4 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCM2LQ9NUG4 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCM2LQ9NUG4 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCM2LQ9NUG4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCM2LQ9NUG4 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCM2LQ9NUG4 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCM2LQ9NUG4 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CCM2LQ9NUG4 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.25■□□□□ 0.67
CCM2LQ9NUG4 AC012414.1-201ENST00000556676 535 ntBASIC19.25■□□□□ 0.67
CCM2LQ9NUG4 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCM2LQ9NUG4 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.25■□□□□ 0.67
CCM2LQ9NUG4 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCM2LQ9NUG4 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCM2LQ9NUG4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CCM2LQ9NUG4 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCM2LQ9NUG4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CCM2LQ9NUG4 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.25■□□□□ 0.67
CCM2LQ9NUG4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.24■□□□□ 0.67
CCM2LQ9NUG4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCM2LQ9NUG4 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CCM2LQ9NUG4 MIR572-201ENST00000384983 95 ntBASIC19.24■□□□□ 0.67
CCM2LQ9NUG4 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.24■□□□□ 0.67
CCM2LQ9NUG4 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.24■□□□□ 0.67
CCM2LQ9NUG4 KRT18P14-201ENST00000534205 1250 ntBASIC19.24■□□□□ 0.67
CCM2LQ9NUG4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.24■□□□□ 0.67
CCM2LQ9NUG4 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.24■□□□□ 0.67
CCM2LQ9NUG4 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCM2LQ9NUG4 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCM2LQ9NUG4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.24■□□□□ 0.67
CCM2LQ9NUG4 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCM2LQ9NUG4 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CCM2LQ9NUG4 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCM2LQ9NUG4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CCM2LQ9NUG4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCM2LQ9NUG4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CCM2LQ9NUG4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.24■□□□□ 0.67
CCM2LQ9NUG4 TNXA-203ENST00000507684 2038 ntBASIC19.24■□□□□ 0.67
CCM2LQ9NUG4 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCM2LQ9NUG4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCM2LQ9NUG4 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
CCM2LQ9NUG4 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.23■□□□□ 0.67
CCM2LQ9NUG4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
CCM2LQ9NUG4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms