Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AL512625.2-201ENST00000417533 625 ntBASIC22.79■■□□□ 1.24
CCSER1Q9C0I3 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC22.79■■□□□ 1.24
CCSER1Q9C0I3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC22.79■■□□□ 1.24
CCSER1Q9C0I3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC22.79■■□□□ 1.24
CCSER1Q9C0I3 VPS53-216ENST00000574029 585 ntTSL 4 BASIC22.79■■□□□ 1.24
CCSER1Q9C0I3 CYP2T3P-201ENST00000601990 817 ntBASIC22.79■■□□□ 1.24
CCSER1Q9C0I3 AC005181.1-201ENST00000604782 1256 ntBASIC22.79■■□□□ 1.24
CCSER1Q9C0I3 RAP2CP1-201ENST00000605103 478 ntBASIC22.79■■□□□ 1.24
CCSER1Q9C0I3 AC008694.1-202ENST00000636953 945 ntBASIC22.79■■□□□ 1.24
CCSER1Q9C0I3 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC22.79■■□□□ 1.24
CCSER1Q9C0I3 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC22.79■■□□□ 1.24
CCSER1Q9C0I3 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC22.79■■□□□ 1.24
CCSER1Q9C0I3 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC22.79■■□□□ 1.24
CCSER1Q9C0I3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CCSER1Q9C0I3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC22.79■■□□□ 1.24
CCSER1Q9C0I3 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
CCSER1Q9C0I3 GCK-205ENST00000437084 1385 ntTSL 5 BASIC22.78■■□□□ 1.24
CCSER1Q9C0I3 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CCSER1Q9C0I3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC22.78■■□□□ 1.24
CCSER1Q9C0I3 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC22.78■■□□□ 1.24
CCSER1Q9C0I3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CCSER1Q9C0I3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CCSER1Q9C0I3 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
CCSER1Q9C0I3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC22.78■■□□□ 1.24
CCSER1Q9C0I3 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC22.78■■□□□ 1.24
CCSER1Q9C0I3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC22.78■■□□□ 1.24
CCSER1Q9C0I3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
CCSER1Q9C0I3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC22.78■■□□□ 1.24
CCSER1Q9C0I3 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC22.78■■□□□ 1.24
CCSER1Q9C0I3 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC22.78■■□□□ 1.24
CCSER1Q9C0I3 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CCSER1Q9C0I3 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CCSER1Q9C0I3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CCSER1Q9C0I3 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CCSER1Q9C0I3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CCSER1Q9C0I3 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC22.77■■□□□ 1.24
CCSER1Q9C0I3 AC099778.1-201ENST00000568593 1911 ntBASIC22.77■■□□□ 1.24
CCSER1Q9C0I3 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CCSER1Q9C0I3 KRT18P68-201ENST00000392293 1000 ntBASIC22.77■■□□□ 1.24
CCSER1Q9C0I3 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC22.77■■□□□ 1.24
CCSER1Q9C0I3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC22.77■■□□□ 1.24
CCSER1Q9C0I3 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC22.77■■□□□ 1.24
CCSER1Q9C0I3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CCSER1Q9C0I3 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC22.77■■□□□ 1.24
CCSER1Q9C0I3 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
CCSER1Q9C0I3 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC22.77■■□□□ 1.24
CCSER1Q9C0I3 SMG8-203ENST00000578922 2178 ntBASIC22.77■■□□□ 1.24
CCSER1Q9C0I3 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC22.77■■□□□ 1.24
CCSER1Q9C0I3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CCSER1Q9C0I3 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CCSER1Q9C0I3 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CCSER1Q9C0I3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
CCSER1Q9C0I3 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC22.77■■□□□ 1.23
CCSER1Q9C0I3 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.23
CCSER1Q9C0I3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC22.76■■□□□ 1.23
CCSER1Q9C0I3 MED17-221ENST00000639724 2317 ntTSL 5 BASIC22.76■■□□□ 1.23
CCSER1Q9C0I3 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CCSER1Q9C0I3 AC010980.2-201ENST00000587099 1412 ntBASIC22.76■■□□□ 1.23
CCSER1Q9C0I3 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
CCSER1Q9C0I3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
CCSER1Q9C0I3 AC133552.2-202ENST00000575694 574 ntBASIC22.76■■□□□ 1.23
CCSER1Q9C0I3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC22.76■■□□□ 1.23
CCSER1Q9C0I3 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC22.76■■□□□ 1.23
CCSER1Q9C0I3 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC22.76■■□□□ 1.23
CCSER1Q9C0I3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC22.76■■□□□ 1.23
CCSER1Q9C0I3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC22.76■■□□□ 1.23
CCSER1Q9C0I3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CCSER1Q9C0I3 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
CCSER1Q9C0I3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
CCSER1Q9C0I3 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CCSER1Q9C0I3 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CCSER1Q9C0I3 DPP3P2-201ENST00000416030 1696 ntBASIC22.75■■□□□ 1.23
CCSER1Q9C0I3 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CCSER1Q9C0I3 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CCSER1Q9C0I3 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC22.75■■□□□ 1.23
CCSER1Q9C0I3 AC105020.6-201ENST00000621523 1217 ntBASIC22.75■■□□□ 1.23
CCSER1Q9C0I3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
CCSER1Q9C0I3 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
CCSER1Q9C0I3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC22.75■■□□□ 1.23
CCSER1Q9C0I3 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CCSER1Q9C0I3 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CCSER1Q9C0I3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CCSER1Q9C0I3 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
CCSER1Q9C0I3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CCSER1Q9C0I3 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CCSER1Q9C0I3 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CCSER1Q9C0I3 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CCSER1Q9C0I3 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC22.74■■□□□ 1.23
CCSER1Q9C0I3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC22.74■■□□□ 1.23
CCSER1Q9C0I3 AC026185.1-201ENST00000445748 174 ntBASIC22.74■■□□□ 1.23
CCSER1Q9C0I3 AC093787.1-201ENST00000450396 207 ntBASIC22.74■■□□□ 1.23
CCSER1Q9C0I3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC22.74■■□□□ 1.23
CCSER1Q9C0I3 AL050303.2-201ENST00000619798 666 ntBASIC22.74■■□□□ 1.23
CCSER1Q9C0I3 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
CCSER1Q9C0I3 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CCSER1Q9C0I3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC22.74■■□□□ 1.23
CCSER1Q9C0I3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CCSER1Q9C0I3 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC22.74■■□□□ 1.23
CCSER1Q9C0I3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
CCSER1Q9C0I3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC22.73■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms