Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PHACTR1Q9C0D0 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
PHACTR1Q9C0D0 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PHACTR1Q9C0D0 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PHACTR1Q9C0D0 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.59■□□□□ 0.89
PHACTR1Q9C0D0 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PHACTR1Q9C0D0 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PHACTR1Q9C0D0 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.59■□□□□ 0.89
PHACTR1Q9C0D0 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PHACTR1Q9C0D0 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PHACTR1Q9C0D0 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PHACTR1Q9C0D0 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.59■□□□□ 0.89
PHACTR1Q9C0D0 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.59■□□□□ 0.89
PHACTR1Q9C0D0 MIR6084-201ENST00000622012 110 ntBASIC20.59■□□□□ 0.89
PHACTR1Q9C0D0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PHACTR1Q9C0D0 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.59■□□□□ 0.89
PHACTR1Q9C0D0 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PHACTR1Q9C0D0 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PHACTR1Q9C0D0 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PHACTR1Q9C0D0 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PHACTR1Q9C0D0 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PHACTR1Q9C0D0 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PHACTR1Q9C0D0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PHACTR1Q9C0D0 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PHACTR1Q9C0D0 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PHACTR1Q9C0D0 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.58■□□□□ 0.89
PHACTR1Q9C0D0 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.58■□□□□ 0.89
PHACTR1Q9C0D0 AC007322.3-201ENST00000426526 701 ntBASIC20.58■□□□□ 0.89
PHACTR1Q9C0D0 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PHACTR1Q9C0D0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.58■□□□□ 0.89
PHACTR1Q9C0D0 FAM21FP-204ENST00000608637 956 ntBASIC20.58■□□□□ 0.89
PHACTR1Q9C0D0 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
PHACTR1Q9C0D0 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PHACTR1Q9C0D0 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
PHACTR1Q9C0D0 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PHACTR1Q9C0D0 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PHACTR1Q9C0D0 BX119927.1-201ENST00000636596 1552 ntBASIC20.58■□□□□ 0.88
PHACTR1Q9C0D0 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.58■□□□□ 0.88
PHACTR1Q9C0D0 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
PHACTR1Q9C0D0 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.88
PHACTR1Q9C0D0 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.58■□□□□ 0.88
PHACTR1Q9C0D0 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PHACTR1Q9C0D0 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
PHACTR1Q9C0D0 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.57■□□□□ 0.88
PHACTR1Q9C0D0 SLC7A5P2-201ENST00000553010 536 ntBASIC20.57■□□□□ 0.88
PHACTR1Q9C0D0 AC142381.2-201ENST00000566120 298 ntBASIC20.57■□□□□ 0.88
PHACTR1Q9C0D0 AP001160.3-201ENST00000601484 763 ntBASIC20.57■□□□□ 0.88
PHACTR1Q9C0D0 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.57■□□□□ 0.88
PHACTR1Q9C0D0 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PHACTR1Q9C0D0 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PHACTR1Q9C0D0 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.57■□□□□ 0.88
PHACTR1Q9C0D0 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.57■□□□□ 0.88
PHACTR1Q9C0D0 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.57■□□□□ 0.88
PHACTR1Q9C0D0 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PHACTR1Q9C0D0 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.57■□□□□ 0.88
PHACTR1Q9C0D0 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PHACTR1Q9C0D0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PHACTR1Q9C0D0 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.57■□□□□ 0.88
PHACTR1Q9C0D0 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
PHACTR1Q9C0D0 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PHACTR1Q9C0D0 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.56■□□□□ 0.88
PHACTR1Q9C0D0 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PHACTR1Q9C0D0 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.56■□□□□ 0.88
PHACTR1Q9C0D0 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.56■□□□□ 0.88
PHACTR1Q9C0D0 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.56■□□□□ 0.88
PHACTR1Q9C0D0 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.56■□□□□ 0.88
PHACTR1Q9C0D0 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.56■□□□□ 0.88
PHACTR1Q9C0D0 RBM17P2-201ENST00000616397 1405 ntBASIC20.56■□□□□ 0.88
PHACTR1Q9C0D0 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PHACTR1Q9C0D0 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PHACTR1Q9C0D0 AC104187.1-201ENST00000607510 612 ntBASIC20.56■□□□□ 0.88
PHACTR1Q9C0D0 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.56■□□□□ 0.88
PHACTR1Q9C0D0 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PHACTR1Q9C0D0 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PHACTR1Q9C0D0 LINC02228-203ENST00000641970 1355 ntBASIC20.56■□□□□ 0.88
PHACTR1Q9C0D0 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PHACTR1Q9C0D0 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.56■□□□□ 0.88
PHACTR1Q9C0D0 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
PHACTR1Q9C0D0 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PHACTR1Q9C0D0 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PHACTR1Q9C0D0 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
PHACTR1Q9C0D0 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PHACTR1Q9C0D0 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PHACTR1Q9C0D0 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PHACTR1Q9C0D0 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PHACTR1Q9C0D0 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PHACTR1Q9C0D0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.55■□□□□ 0.88
PHACTR1Q9C0D0 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.55■□□□□ 0.88
PHACTR1Q9C0D0 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PHACTR1Q9C0D0 AC005837.3-201ENST00000612163 286 ntBASIC20.55■□□□□ 0.88
PHACTR1Q9C0D0 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
PHACTR1Q9C0D0 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
PHACTR1Q9C0D0 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PHACTR1Q9C0D0 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PHACTR1Q9C0D0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
PHACTR1Q9C0D0 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.55■□□□□ 0.88
PHACTR1Q9C0D0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PHACTR1Q9C0D0 DPP3P2-201ENST00000416030 1696 ntBASIC20.54■□□□□ 0.88
PHACTR1Q9C0D0 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PHACTR1Q9C0D0 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms