Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
FOXP3Q9BZS1 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.93■□□□□ 0.94
FOXP3Q9BZS1 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.93■□□□□ 0.94
FOXP3Q9BZS1 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FOXP3Q9BZS1 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
FOXP3Q9BZS1 AC026185.1-201ENST00000445748 174 ntBASIC20.93■□□□□ 0.94
FOXP3Q9BZS1 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.93■□□□□ 0.94
FOXP3Q9BZS1 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.93■□□□□ 0.94
FOXP3Q9BZS1 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.93■□□□□ 0.94
FOXP3Q9BZS1 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.93■□□□□ 0.94
FOXP3Q9BZS1 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
FOXP3Q9BZS1 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FOXP3Q9BZS1 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
FOXP3Q9BZS1 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
FOXP3Q9BZS1 AC112907.3-201ENST00000577781 2400 ntBASIC20.93■□□□□ 0.94
FOXP3Q9BZS1 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.92■□□□□ 0.94
FOXP3Q9BZS1 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.92■□□□□ 0.94
FOXP3Q9BZS1 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
FOXP3Q9BZS1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.92■□□□□ 0.94
FOXP3Q9BZS1 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
FOXP3Q9BZS1 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
FOXP3Q9BZS1 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.92■□□□□ 0.94
FOXP3Q9BZS1 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.92■□□□□ 0.94
FOXP3Q9BZS1 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
FOXP3Q9BZS1 AC079140.4-201ENST00000507448 529 ntBASIC20.92■□□□□ 0.94
FOXP3Q9BZS1 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.92■□□□□ 0.94
FOXP3Q9BZS1 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.92■□□□□ 0.94
FOXP3Q9BZS1 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.92■□□□□ 0.94
FOXP3Q9BZS1 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
FOXP3Q9BZS1 PCDHAC2-203ENST00000615316 3011 ntBASIC20.92■□□□□ 0.94
FOXP3Q9BZS1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
FOXP3Q9BZS1 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
FOXP3Q9BZS1 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.92■□□□□ 0.94
FOXP3Q9BZS1 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
FOXP3Q9BZS1 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
FOXP3Q9BZS1 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
FOXP3Q9BZS1 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.92■□□□□ 0.94
FOXP3Q9BZS1 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
FOXP3Q9BZS1 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
FOXP3Q9BZS1 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
FOXP3Q9BZS1 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
FOXP3Q9BZS1 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
FOXP3Q9BZS1 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
FOXP3Q9BZS1 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.91■□□□□ 0.94
FOXP3Q9BZS1 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXP3Q9BZS1 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXP3Q9BZS1 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.9■□□□□ 0.94
FOXP3Q9BZS1 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
FOXP3Q9BZS1 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXP3Q9BZS1 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXP3Q9BZS1 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.9■□□□□ 0.94
FOXP3Q9BZS1 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.9■□□□□ 0.94
FOXP3Q9BZS1 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.9■□□□□ 0.94
FOXP3Q9BZS1 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
FOXP3Q9BZS1 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXP3Q9BZS1 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXP3Q9BZS1 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
FOXP3Q9BZS1 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
FOXP3Q9BZS1 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
FOXP3Q9BZS1 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.94
FOXP3Q9BZS1 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FOXP3Q9BZS1 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
FOXP3Q9BZS1 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.89■□□□□ 0.93
FOXP3Q9BZS1 AC006970.2-201ENST00000450065 779 ntBASIC20.89■□□□□ 0.93
FOXP3Q9BZS1 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
FOXP3Q9BZS1 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.89■□□□□ 0.93
FOXP3Q9BZS1 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.89■□□□□ 0.93
FOXP3Q9BZS1 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.89■□□□□ 0.93
FOXP3Q9BZS1 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
FOXP3Q9BZS1 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FOXP3Q9BZS1 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
FOXP3Q9BZS1 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.89■□□□□ 0.93
FOXP3Q9BZS1 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
FOXP3Q9BZS1 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FOXP3Q9BZS1 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
FOXP3Q9BZS1 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FOXP3Q9BZS1 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FOXP3Q9BZS1 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
FOXP3Q9BZS1 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
FOXP3Q9BZS1 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.89■□□□□ 0.93
FOXP3Q9BZS1 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.88■□□□□ 0.93
FOXP3Q9BZS1 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.88■□□□□ 0.93
FOXP3Q9BZS1 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.88■□□□□ 0.93
FOXP3Q9BZS1 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.88■□□□□ 0.93
FOXP3Q9BZS1 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.88■□□□□ 0.93
FOXP3Q9BZS1 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXP3Q9BZS1 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXP3Q9BZS1 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXP3Q9BZS1 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXP3Q9BZS1 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXP3Q9BZS1 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXP3Q9BZS1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
FOXP3Q9BZS1 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.88■□□□□ 0.93
FOXP3Q9BZS1 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.88■□□□□ 0.93
FOXP3Q9BZS1 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
FOXP3Q9BZS1 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.88■□□□□ 0.93
FOXP3Q9BZS1 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.88■□□□□ 0.93
FOXP3Q9BZS1 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.88■□□□□ 0.93
FOXP3Q9BZS1 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
FOXP3Q9BZS1 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms