Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK3BQ9BT76 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
UPK3BQ9BT76 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC14.1□□□□□ -0.15
UPK3BQ9BT76 BID-212ENST00000614949 1988 ntTSL 5 BASIC14.1□□□□□ -0.15
UPK3BQ9BT76 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK3BQ9BT76 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK3BQ9BT76 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
UPK3BQ9BT76 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UPK3BQ9BT76 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
UPK3BQ9BT76 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK3BQ9BT76 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK3BQ9BT76 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK3BQ9BT76 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC14.09□□□□□ -0.15
UPK3BQ9BT76 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC14.09□□□□□ -0.15
UPK3BQ9BT76 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
UPK3BQ9BT76 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UPK3BQ9BT76 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK3BQ9BT76 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK3BQ9BT76 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
UPK3BQ9BT76 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
UPK3BQ9BT76 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK3BQ9BT76 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK3BQ9BT76 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC14.09□□□□□ -0.15
UPK3BQ9BT76 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
UPK3BQ9BT76 PGM5P4-201ENST00000421970 445 ntBASIC14.09□□□□□ -0.15
UPK3BQ9BT76 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UPK3BQ9BT76 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC14.09□□□□□ -0.15
UPK3BQ9BT76 RHEB-204ENST00000472642 900 ntTSL 3 BASIC14.09□□□□□ -0.15
UPK3BQ9BT76 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC14.09□□□□□ -0.15
UPK3BQ9BT76 AC098934.4-201ENST00000564127 592 ntBASIC14.09□□□□□ -0.15
UPK3BQ9BT76 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC14.09□□□□□ -0.15
UPK3BQ9BT76 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UPK3BQ9BT76 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC14.09□□□□□ -0.15
UPK3BQ9BT76 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC14.09□□□□□ -0.15
UPK3BQ9BT76 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK3BQ9BT76 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK3BQ9BT76 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC14.09□□□□□ -0.15
UPK3BQ9BT76 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK3BQ9BT76 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UPK3BQ9BT76 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC14.09□□□□□ -0.15
UPK3BQ9BT76 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC14.09□□□□□ -0.15
UPK3BQ9BT76 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC14.09□□□□□ -0.15
UPK3BQ9BT76 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UPK3BQ9BT76 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK3BQ9BT76 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UPK3BQ9BT76 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UPK3BQ9BT76 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC14.08□□□□□ -0.15
UPK3BQ9BT76 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
UPK3BQ9BT76 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UPK3BQ9BT76 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
UPK3BQ9BT76 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC14.08□□□□□ -0.16
UPK3BQ9BT76 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC14.08□□□□□ -0.16
UPK3BQ9BT76 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
UPK3BQ9BT76 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC14.08□□□□□ -0.16
UPK3BQ9BT76 EXOC3-AS1-202ENST00000623673 1663 ntBASIC14.08□□□□□ -0.16
UPK3BQ9BT76 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UPK3BQ9BT76 CYP21A1P-202ENST00000354927 1481 ntBASIC14.08□□□□□ -0.16
UPK3BQ9BT76 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
UPK3BQ9BT76 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
UPK3BQ9BT76 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UPK3BQ9BT76 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
UPK3BQ9BT76 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC14.08□□□□□ -0.16
UPK3BQ9BT76 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC14.08□□□□□ -0.16
UPK3BQ9BT76 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC14.08□□□□□ -0.16
UPK3BQ9BT76 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC14.08□□□□□ -0.16
UPK3BQ9BT76 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC14.08□□□□□ -0.16
UPK3BQ9BT76 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC14.08□□□□□ -0.16
UPK3BQ9BT76 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC14.08□□□□□ -0.16
UPK3BQ9BT76 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
UPK3BQ9BT76 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
UPK3BQ9BT76 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UPK3BQ9BT76 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
UPK3BQ9BT76 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC14.08□□□□□ -0.16
UPK3BQ9BT76 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC14.08□□□□□ -0.16
UPK3BQ9BT76 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UPK3BQ9BT76 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UPK3BQ9BT76 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC14.08□□□□□ -0.16
UPK3BQ9BT76 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UPK3BQ9BT76 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC14.08□□□□□ -0.16
UPK3BQ9BT76 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
UPK3BQ9BT76 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
UPK3BQ9BT76 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UPK3BQ9BT76 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UPK3BQ9BT76 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UPK3BQ9BT76 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC14.07□□□□□ -0.16
UPK3BQ9BT76 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC14.07□□□□□ -0.16
UPK3BQ9BT76 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UPK3BQ9BT76 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC14.07□□□□□ -0.16
UPK3BQ9BT76 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
UPK3BQ9BT76 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UPK3BQ9BT76 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UPK3BQ9BT76 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
UPK3BQ9BT76 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC14.07□□□□□ -0.16
UPK3BQ9BT76 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
UPK3BQ9BT76 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
UPK3BQ9BT76 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UPK3BQ9BT76 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
UPK3BQ9BT76 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UPK3BQ9BT76 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UPK3BQ9BT76 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms