Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AC120498.10-201ENST00000621827 505 ntBASIC17.12■□□□□ 0.33
HDHD3Q9BSH5 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.12■□□□□ 0.33
HDHD3Q9BSH5 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDHD3Q9BSH5 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDHD3Q9BSH5 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDHD3Q9BSH5 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDHD3Q9BSH5 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HDHD3Q9BSH5 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
HDHD3Q9BSH5 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDHD3Q9BSH5 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDHD3Q9BSH5 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.12■□□□□ 0.33
HDHD3Q9BSH5 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.12■□□□□ 0.33
HDHD3Q9BSH5 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDHD3Q9BSH5 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDHD3Q9BSH5 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HDHD3Q9BSH5 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HDHD3Q9BSH5 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HDHD3Q9BSH5 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.11■□□□□ 0.33
HDHD3Q9BSH5 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.11■□□□□ 0.33
HDHD3Q9BSH5 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HDHD3Q9BSH5 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HDHD3Q9BSH5 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HDHD3Q9BSH5 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HDHD3Q9BSH5 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HDHD3Q9BSH5 AC125437.2-201ENST00000625180 2167 ntBASIC17.11■□□□□ 0.33
HDHD3Q9BSH5 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HDHD3Q9BSH5 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HDHD3Q9BSH5 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
HDHD3Q9BSH5 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HDHD3Q9BSH5 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.11■□□□□ 0.33
HDHD3Q9BSH5 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.11■□□□□ 0.33
HDHD3Q9BSH5 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HDHD3Q9BSH5 AC104187.1-201ENST00000607510 612 ntBASIC17.11■□□□□ 0.33
HDHD3Q9BSH5 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HDHD3Q9BSH5 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HDHD3Q9BSH5 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HDHD3Q9BSH5 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.11■□□□□ 0.33
HDHD3Q9BSH5 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HDHD3Q9BSH5 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HDHD3Q9BSH5 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HDHD3Q9BSH5 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HDHD3Q9BSH5 AL158211.5-201ENST00000623583 2518 ntBASIC17.1■□□□□ 0.33
HDHD3Q9BSH5 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.1■□□□□ 0.33
HDHD3Q9BSH5 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HDHD3Q9BSH5 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.1■□□□□ 0.33
HDHD3Q9BSH5 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HDHD3Q9BSH5 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HDHD3Q9BSH5 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HDHD3Q9BSH5 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
HDHD3Q9BSH5 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HDHD3Q9BSH5 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HDHD3Q9BSH5 AL139246.5-201ENST00000606645 996 ntBASIC17.1■□□□□ 0.33
HDHD3Q9BSH5 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
HDHD3Q9BSH5 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HDHD3Q9BSH5 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HDHD3Q9BSH5 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HDHD3Q9BSH5 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HDHD3Q9BSH5 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HDHD3Q9BSH5 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.1■□□□□ 0.33
HDHD3Q9BSH5 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.09■□□□□ 0.33
HDHD3Q9BSH5 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HDHD3Q9BSH5 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HDHD3Q9BSH5 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.09■□□□□ 0.33
HDHD3Q9BSH5 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.09■□□□□ 0.33
HDHD3Q9BSH5 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.09■□□□□ 0.33
HDHD3Q9BSH5 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HDHD3Q9BSH5 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HDHD3Q9BSH5 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HDHD3Q9BSH5 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HDHD3Q9BSH5 AC105265.2-201ENST00000467189 838 ntBASIC17.09■□□□□ 0.33
HDHD3Q9BSH5 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.09■□□□□ 0.33
HDHD3Q9BSH5 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.09■□□□□ 0.33
HDHD3Q9BSH5 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HDHD3Q9BSH5 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.09■□□□□ 0.33
HDHD3Q9BSH5 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HDHD3Q9BSH5 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.09■□□□□ 0.33
HDHD3Q9BSH5 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HDHD3Q9BSH5 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.09■□□□□ 0.33
HDHD3Q9BSH5 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HDHD3Q9BSH5 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HDHD3Q9BSH5 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
HDHD3Q9BSH5 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
HDHD3Q9BSH5 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.09■□□□□ 0.33
HDHD3Q9BSH5 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HDHD3Q9BSH5 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HDHD3Q9BSH5 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
HDHD3Q9BSH5 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HDHD3Q9BSH5 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.08■□□□□ 0.33
HDHD3Q9BSH5 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
HDHD3Q9BSH5 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.08■□□□□ 0.33
HDHD3Q9BSH5 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HDHD3Q9BSH5 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
HDHD3Q9BSH5 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
HDHD3Q9BSH5 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
HDHD3Q9BSH5 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.08■□□□□ 0.32
HDHD3Q9BSH5 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HDHD3Q9BSH5 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HDHD3Q9BSH5 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.08■□□□□ 0.32
HDHD3Q9BSH5 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.08■□□□□ 0.32
HDHD3Q9BSH5 DUX4L2-201ENST00000561772 1275 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms