Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
CMSS1Q9BQ75 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.3■□□□□ 0.36
CMSS1Q9BQ75 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CMSS1Q9BQ75 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CMSS1Q9BQ75 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CMSS1Q9BQ75 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CMSS1Q9BQ75 AC099778.1-201ENST00000568593 1911 ntBASIC17.29■□□□□ 0.36
CMSS1Q9BQ75 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CMSS1Q9BQ75 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CMSS1Q9BQ75 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CMSS1Q9BQ75 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CMSS1Q9BQ75 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CMSS1Q9BQ75 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CMSS1Q9BQ75 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.29■□□□□ 0.36
CMSS1Q9BQ75 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CMSS1Q9BQ75 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.29■□□□□ 0.36
CMSS1Q9BQ75 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.29■□□□□ 0.36
CMSS1Q9BQ75 AC012414.1-201ENST00000556676 535 ntBASIC17.29■□□□□ 0.36
CMSS1Q9BQ75 AL355001.2-201ENST00000620617 1191 ntBASIC17.29■□□□□ 0.36
CMSS1Q9BQ75 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CMSS1Q9BQ75 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.29■□□□□ 0.36
CMSS1Q9BQ75 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CMSS1Q9BQ75 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CMSS1Q9BQ75 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.29■□□□□ 0.36
CMSS1Q9BQ75 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.29■□□□□ 0.36
CMSS1Q9BQ75 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CMSS1Q9BQ75 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CMSS1Q9BQ75 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CMSS1Q9BQ75 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CMSS1Q9BQ75 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CMSS1Q9BQ75 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CMSS1Q9BQ75 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.29■□□□□ 0.36
CMSS1Q9BQ75 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CMSS1Q9BQ75 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CMSS1Q9BQ75 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CMSS1Q9BQ75 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CMSS1Q9BQ75 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CMSS1Q9BQ75 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CMSS1Q9BQ75 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CMSS1Q9BQ75 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CMSS1Q9BQ75 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CMSS1Q9BQ75 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CMSS1Q9BQ75 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CMSS1Q9BQ75 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.28■□□□□ 0.36
CMSS1Q9BQ75 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CMSS1Q9BQ75 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CMSS1Q9BQ75 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CMSS1Q9BQ75 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.28■□□□□ 0.36
CMSS1Q9BQ75 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
CMSS1Q9BQ75 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.28■□□□□ 0.36
CMSS1Q9BQ75 AC091305.1-201ENST00000479476 895 ntBASIC17.28■□□□□ 0.36
CMSS1Q9BQ75 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.28■□□□□ 0.36
CMSS1Q9BQ75 AF213884.3-201ENST00000563833 479 ntBASIC17.28■□□□□ 0.36
CMSS1Q9BQ75 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.28■□□□□ 0.36
CMSS1Q9BQ75 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CMSS1Q9BQ75 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.28■□□□□ 0.36
CMSS1Q9BQ75 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CMSS1Q9BQ75 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CMSS1Q9BQ75 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CMSS1Q9BQ75 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CMSS1Q9BQ75 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CMSS1Q9BQ75 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.28■□□□□ 0.36
CMSS1Q9BQ75 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.27■□□□□ 0.36
CMSS1Q9BQ75 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CMSS1Q9BQ75 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.27■□□□□ 0.36
CMSS1Q9BQ75 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.27■□□□□ 0.36
CMSS1Q9BQ75 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CMSS1Q9BQ75 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CMSS1Q9BQ75 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CMSS1Q9BQ75 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CMSS1Q9BQ75 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CMSS1Q9BQ75 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CMSS1Q9BQ75 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CMSS1Q9BQ75 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CMSS1Q9BQ75 MIR939-201ENST00000401314 82 ntBASIC17.27■□□□□ 0.36
CMSS1Q9BQ75 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CMSS1Q9BQ75 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.27■□□□□ 0.36
CMSS1Q9BQ75 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.27■□□□□ 0.36
CMSS1Q9BQ75 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.27■□□□□ 0.36
CMSS1Q9BQ75 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
CMSS1Q9BQ75 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CMSS1Q9BQ75 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CMSS1Q9BQ75 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
CMSS1Q9BQ75 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CMSS1Q9BQ75 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CMSS1Q9BQ75 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CMSS1Q9BQ75 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.26■□□□□ 0.35
CMSS1Q9BQ75 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CMSS1Q9BQ75 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.26■□□□□ 0.35
CMSS1Q9BQ75 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CMSS1Q9BQ75 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CMSS1Q9BQ75 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.26■□□□□ 0.35
CMSS1Q9BQ75 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CMSS1Q9BQ75 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.26■□□□□ 0.35
CMSS1Q9BQ75 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.26■□□□□ 0.35
CMSS1Q9BQ75 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CMSS1Q9BQ75 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.26■□□□□ 0.35
CMSS1Q9BQ75 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CMSS1Q9BQ75 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.26■□□□□ 0.35
CMSS1Q9BQ75 AL354811.1-201ENST00000610286 706 ntBASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms