Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.84■□□□□ 0.45
VRK1Q99986 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
VRK1Q99986 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
VRK1Q99986 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
VRK1Q99986 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.84■□□□□ 0.45
VRK1Q99986 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
VRK1Q99986 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
VRK1Q99986 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VRK1Q99986 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VRK1Q99986 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.84■□□□□ 0.45
VRK1Q99986 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
VRK1Q99986 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VRK1Q99986 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.84■□□□□ 0.45
VRK1Q99986 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
VRK1Q99986 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VRK1Q99986 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
VRK1Q99986 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
VRK1Q99986 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.83■□□□□ 0.45
VRK1Q99986 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
VRK1Q99986 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.83■□□□□ 0.45
VRK1Q99986 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.83■□□□□ 0.45
VRK1Q99986 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
VRK1Q99986 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
VRK1Q99986 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
VRK1Q99986 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
VRK1Q99986 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.83■□□□□ 0.45
VRK1Q99986 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.83■□□□□ 0.45
VRK1Q99986 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
VRK1Q99986 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.83■□□□□ 0.44
VRK1Q99986 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VRK1Q99986 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
VRK1Q99986 AL138781.1-201ENST00000566567 1274 ntBASIC17.83■□□□□ 0.44
VRK1Q99986 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.83■□□□□ 0.44
VRK1Q99986 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VRK1Q99986 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.83■□□□□ 0.44
VRK1Q99986 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VRK1Q99986 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
VRK1Q99986 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VRK1Q99986 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VRK1Q99986 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.83■□□□□ 0.44
VRK1Q99986 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
VRK1Q99986 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
VRK1Q99986 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VRK1Q99986 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
VRK1Q99986 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.82■□□□□ 0.44
VRK1Q99986 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.82■□□□□ 0.44
VRK1Q99986 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.82■□□□□ 0.44
VRK1Q99986 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VRK1Q99986 AC007322.4-201ENST00000509611 723 ntBASIC17.82■□□□□ 0.44
VRK1Q99986 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.82■□□□□ 0.44
VRK1Q99986 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.82■□□□□ 0.44
VRK1Q99986 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
VRK1Q99986 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.82■□□□□ 0.44
VRK1Q99986 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VRK1Q99986 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VRK1Q99986 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
VRK1Q99986 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VRK1Q99986 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VRK1Q99986 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
VRK1Q99986 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
VRK1Q99986 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.82■□□□□ 0.44
VRK1Q99986 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VRK1Q99986 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.82■□□□□ 0.44
VRK1Q99986 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VRK1Q99986 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.81■□□□□ 0.44
VRK1Q99986 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.81■□□□□ 0.44
VRK1Q99986 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
VRK1Q99986 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.81■□□□□ 0.44
VRK1Q99986 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VRK1Q99986 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
VRK1Q99986 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VRK1Q99986 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.81■□□□□ 0.44
VRK1Q99986 GUSBP6-202ENST00000438529 1198 ntBASIC17.81■□□□□ 0.44
VRK1Q99986 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.81■□□□□ 0.44
VRK1Q99986 AC142086.2-201ENST00000569753 217 ntBASIC17.81■□□□□ 0.44
VRK1Q99986 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.81■□□□□ 0.44
VRK1Q99986 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.81■□□□□ 0.44
VRK1Q99986 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.81■□□□□ 0.44
VRK1Q99986 MKRN4P-201ENST00000444706 1521 ntBASIC17.81■□□□□ 0.44
VRK1Q99986 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.81■□□□□ 0.44
VRK1Q99986 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.81■□□□□ 0.44
VRK1Q99986 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VRK1Q99986 RBM17P2-201ENST00000616397 1405 ntBASIC17.81■□□□□ 0.44
VRK1Q99986 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VRK1Q99986 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VRK1Q99986 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VRK1Q99986 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VRK1Q99986 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
VRK1Q99986 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VRK1Q99986 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.8■□□□□ 0.44
VRK1Q99986 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VRK1Q99986 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.8■□□□□ 0.44
VRK1Q99986 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
VRK1Q99986 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.8■□□□□ 0.44
VRK1Q99986 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.8■□□□□ 0.44
VRK1Q99986 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.8■□□□□ 0.44
VRK1Q99986 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.8■□□□□ 0.44
VRK1Q99986 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VRK1Q99986 AL591742.1-201ENST00000604433 565 ntBASIC17.8■□□□□ 0.44
VRK1Q99986 AC016405.3-201ENST00000607710 860 ntBASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms