Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.37■■□□□ 1.01
SMOQ99835 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SMOQ99835 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
SMOQ99835 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SMOQ99835 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SMOQ99835 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMOQ99835 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
SMOQ99835 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMOQ99835 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SMOQ99835 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMOQ99835 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.36■■□□□ 1.01
SMOQ99835 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.36■■□□□ 1.01
SMOQ99835 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.36■■□□□ 1.01
SMOQ99835 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SMOQ99835 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
SMOQ99835 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMOQ99835 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMOQ99835 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMOQ99835 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
SMOQ99835 AC092368.3-202ENST00000574180 1591 ntBASIC21.36■■□□□ 1.01
SMOQ99835 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMOQ99835 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMOQ99835 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMOQ99835 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
SMOQ99835 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.35■■□□□ 1.01
SMOQ99835 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.35■■□□□ 1.01
SMOQ99835 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.35■■□□□ 1.01
SMOQ99835 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
SMOQ99835 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
SMOQ99835 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.35■■□□□ 1.01
SMOQ99835 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SMOQ99835 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
SMOQ99835 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMOQ99835 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMOQ99835 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMOQ99835 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
SMOQ99835 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.34■■□□□ 1.01
SMOQ99835 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMOQ99835 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMOQ99835 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
SMOQ99835 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.34■■□□□ 1.01
SMOQ99835 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.34■■□□□ 1.01
SMOQ99835 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.34■■□□□ 1.01
SMOQ99835 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.34■■□□□ 1.01
SMOQ99835 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMOQ99835 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.34■■□□□ 1.01
SMOQ99835 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMOQ99835 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SMOQ99835 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.34■■□□□ 1.01
SMOQ99835 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMOQ99835 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SMOQ99835 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SMOQ99835 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SMOQ99835 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.33■■□□□ 1.01
SMOQ99835 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.33■■□□□ 1.01
SMOQ99835 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SMOQ99835 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
SMOQ99835 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SMOQ99835 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.33■■□□□ 1.01
SMOQ99835 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SMOQ99835 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SMOQ99835 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.33■■□□□ 1.01
SMOQ99835 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.33■■□□□ 1.01
SMOQ99835 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.33■■□□□ 1
SMOQ99835 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
SMOQ99835 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SMOQ99835 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
SMOQ99835 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SMOQ99835 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.32■■□□□ 1
SMOQ99835 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.32■■□□□ 1
SMOQ99835 POU5F1P3-201ENST00000428824 1078 ntBASIC21.32■■□□□ 1
SMOQ99835 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.32■■□□□ 1
SMOQ99835 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.32■■□□□ 1
SMOQ99835 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.32■■□□□ 1
SMOQ99835 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
SMOQ99835 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SMOQ99835 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.32■■□□□ 1
SMOQ99835 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SMOQ99835 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SMOQ99835 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SMOQ99835 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.31■■□□□ 1
SMOQ99835 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
SMOQ99835 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SMOQ99835 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SMOQ99835 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
SMOQ99835 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SMOQ99835 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.31■■□□□ 1
SMOQ99835 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SMOQ99835 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
SMOQ99835 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
SMOQ99835 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SMOQ99835 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SMOQ99835 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SMOQ99835 ESRRAP1-201ENST00000400596 1257 ntBASIC21.31■■□□□ 1
SMOQ99835 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.31■■□□□ 1
SMOQ99835 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SMOQ99835 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.31■■□□□ 1
SMOQ99835 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.31■■□□□ 1
SMOQ99835 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.31■■□□□ 1
SMOQ99835 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms