Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.76■□□□□ 0.59
TM9SF2Q99805 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.76■□□□□ 0.59
TM9SF2Q99805 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TM9SF2Q99805 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TM9SF2Q99805 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TM9SF2Q99805 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TM9SF2Q99805 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
TM9SF2Q99805 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TM9SF2Q99805 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.75■□□□□ 0.59
TM9SF2Q99805 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.75■□□□□ 0.59
TM9SF2Q99805 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TM9SF2Q99805 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TM9SF2Q99805 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TM9SF2Q99805 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.75■□□□□ 0.59
TM9SF2Q99805 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.75■□□□□ 0.59
TM9SF2Q99805 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.75■□□□□ 0.59
TM9SF2Q99805 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.75■□□□□ 0.59
TM9SF2Q99805 AL355802.2-201ENST00000402069 882 ntBASIC18.75■□□□□ 0.59
TM9SF2Q99805 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TM9SF2Q99805 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.75■□□□□ 0.59
TM9SF2Q99805 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.75■□□□□ 0.59
TM9SF2Q99805 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.75■□□□□ 0.59
TM9SF2Q99805 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.75■□□□□ 0.59
TM9SF2Q99805 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TM9SF2Q99805 AL050303.2-201ENST00000619798 666 ntBASIC18.75■□□□□ 0.59
TM9SF2Q99805 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
TM9SF2Q99805 AC073314.1-201ENST00000568729 2216 ntBASIC18.75■□□□□ 0.59
TM9SF2Q99805 AFG3L1P-217ENST00000557444 2447 ntBASIC18.75■□□□□ 0.59
TM9SF2Q99805 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
TM9SF2Q99805 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.75■□□□□ 0.59
TM9SF2Q99805 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.75■□□□□ 0.59
TM9SF2Q99805 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TM9SF2Q99805 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.75■□□□□ 0.59
TM9SF2Q99805 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
TM9SF2Q99805 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TM9SF2Q99805 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TM9SF2Q99805 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.75■□□□□ 0.59
TM9SF2Q99805 AP005212.1-201ENST00000581547 1997 ntBASIC18.75■□□□□ 0.59
TM9SF2Q99805 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.75■□□□□ 0.59
TM9SF2Q99805 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TM9SF2Q99805 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.75■□□□□ 0.59
TM9SF2Q99805 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TM9SF2Q99805 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TM9SF2Q99805 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM9SF2Q99805 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TM9SF2Q99805 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM9SF2Q99805 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.74■□□□□ 0.59
TM9SF2Q99805 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM9SF2Q99805 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM9SF2Q99805 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.74■□□□□ 0.59
TM9SF2Q99805 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM9SF2Q99805 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TM9SF2Q99805 GABARAPL3-202ENST00000624044 1851 ntBASIC18.74■□□□□ 0.59
TM9SF2Q99805 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM9SF2Q99805 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM9SF2Q99805 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM9SF2Q99805 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.74■□□□□ 0.59
TM9SF2Q99805 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM9SF2Q99805 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TM9SF2Q99805 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM9SF2Q99805 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TM9SF2Q99805 SLC29A4P1-201ENST00000398760 971 ntBASIC18.74■□□□□ 0.59
TM9SF2Q99805 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
TM9SF2Q99805 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.74■□□□□ 0.59
TM9SF2Q99805 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.74■□□□□ 0.59
TM9SF2Q99805 AC133552.2-202ENST00000575694 574 ntBASIC18.74■□□□□ 0.59
TM9SF2Q99805 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM9SF2Q99805 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM9SF2Q99805 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM9SF2Q99805 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
TM9SF2Q99805 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TM9SF2Q99805 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TM9SF2Q99805 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM9SF2Q99805 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.73■□□□□ 0.59
TM9SF2Q99805 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TM9SF2Q99805 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TM9SF2Q99805 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TM9SF2Q99805 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.73■□□□□ 0.59
TM9SF2Q99805 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
TM9SF2Q99805 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TM9SF2Q99805 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TM9SF2Q99805 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.73■□□□□ 0.59
TM9SF2Q99805 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.73■□□□□ 0.59
TM9SF2Q99805 AF201337.1-201ENST00000520239 748 ntBASIC18.73■□□□□ 0.59
TM9SF2Q99805 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TM9SF2Q99805 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TM9SF2Q99805 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TM9SF2Q99805 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TM9SF2Q99805 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.73■□□□□ 0.59
TM9SF2Q99805 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
TM9SF2Q99805 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.73■□□□□ 0.59
TM9SF2Q99805 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TM9SF2Q99805 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.73■□□□□ 0.59
TM9SF2Q99805 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TM9SF2Q99805 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM9SF2Q99805 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TM9SF2Q99805 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
TM9SF2Q99805 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM9SF2Q99805 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.72■□□□□ 0.59
TM9SF2Q99805 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms