Protein–RNA interactions for Protein: Q96PU9

ODF3, Outer dense fiber protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3Q96PU9 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC15□□□□□ -0.01
ODF3Q96PU9 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC15□□□□□ -0.01
ODF3Q96PU9 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC15□□□□□ -0.01
ODF3Q96PU9 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
ODF3Q96PU9 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC15□□□□□ -0.01
ODF3Q96PU9 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
ODF3Q96PU9 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
ODF3Q96PU9 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ODF3Q96PU9 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ODF3Q96PU9 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ODF3Q96PU9 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC14.99□□□□□ -0.01
ODF3Q96PU9 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC14.99□□□□□ -0.01
ODF3Q96PU9 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ODF3Q96PU9 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
ODF3Q96PU9 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
ODF3Q96PU9 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC14.99□□□□□ -0.01
ODF3Q96PU9 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC14.99□□□□□ -0.01
ODF3Q96PU9 BRI3-207ENST00000539286 699 ntTSL 2 BASIC14.99□□□□□ -0.01
ODF3Q96PU9 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ODF3Q96PU9 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC14.99□□□□□ -0.01
ODF3Q96PU9 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
ODF3Q96PU9 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ODF3Q96PU9 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ODF3Q96PU9 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ODF3Q96PU9 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC14.99□□□□□ -0.01
ODF3Q96PU9 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ODF3Q96PU9 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ODF3Q96PU9 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
ODF3Q96PU9 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
ODF3Q96PU9 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ODF3Q96PU9 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
ODF3Q96PU9 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC14.98□□□□□ -0.01
ODF3Q96PU9 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC14.98□□□□□ -0.01
ODF3Q96PU9 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ODF3Q96PU9 VMO1-204ENST00000441199 741 ntTSL 2 BASIC14.98□□□□□ -0.01
ODF3Q96PU9 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ODF3Q96PU9 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC14.98□□□□□ -0.01
ODF3Q96PU9 PLD4-205ENST00000553861 667 ntTSL 2 BASIC14.98□□□□□ -0.01
ODF3Q96PU9 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC14.98□□□□□ -0.01
ODF3Q96PU9 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ODF3Q96PU9 AL356652.1-201ENST00000615962 565 ntBASIC14.98□□□□□ -0.01
ODF3Q96PU9 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ODF3Q96PU9 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ODF3Q96PU9 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ODF3Q96PU9 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ODF3Q96PU9 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ODF3Q96PU9 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
ODF3Q96PU9 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
ODF3Q96PU9 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ODF3Q96PU9 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ODF3Q96PU9 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ODF3Q96PU9 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ODF3Q96PU9 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ODF3Q96PU9 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ODF3Q96PU9 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ODF3Q96PU9 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ODF3Q96PU9 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ODF3Q96PU9 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ODF3Q96PU9 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ODF3Q96PU9 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
ODF3Q96PU9 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ODF3Q96PU9 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
ODF3Q96PU9 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ODF3Q96PU9 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
ODF3Q96PU9 DBI-210ENST00000542275 757 ntTSL 5 BASIC14.97□□□□□ -0.01
ODF3Q96PU9 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ODF3Q96PU9 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC14.97□□□□□ -0.01
ODF3Q96PU9 AC100791.3-201ENST00000617619 330 ntBASIC14.97□□□□□ -0.01
ODF3Q96PU9 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ODF3Q96PU9 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
ODF3Q96PU9 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ODF3Q96PU9 TCF3P1-201ENST00000423021 1937 ntBASIC14.97□□□□□ -0.01
ODF3Q96PU9 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
ODF3Q96PU9 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ODF3Q96PU9 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ODF3Q96PU9 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ODF3Q96PU9 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC14.97□□□□□ -0.01
ODF3Q96PU9 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ODF3Q96PU9 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ODF3Q96PU9 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC14.97□□□□□ -0.01
ODF3Q96PU9 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ODF3Q96PU9 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ODF3Q96PU9 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ODF3Q96PU9 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC14.96□□□□□ -0.01
ODF3Q96PU9 CYP21A1P-202ENST00000354927 1481 ntBASIC14.96□□□□□ -0.01
ODF3Q96PU9 HACD1-201ENST00000326961 773 ntTSL 2 BASIC14.96□□□□□ -0.01
ODF3Q96PU9 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ODF3Q96PU9 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC14.96□□□□□ -0.01
ODF3Q96PU9 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC14.96□□□□□ -0.01
ODF3Q96PU9 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC14.96□□□□□ -0.01
ODF3Q96PU9 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC14.96□□□□□ -0.01
ODF3Q96PU9 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC14.96□□□□□ -0.01
ODF3Q96PU9 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC14.96□□□□□ -0.01
ODF3Q96PU9 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
ODF3Q96PU9 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
ODF3Q96PU9 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.02
ODF3Q96PU9 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
ODF3Q96PU9 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
ODF3Q96PU9 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
ODF3Q96PU9 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms