Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CALR3Q96L12 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CALR3Q96L12 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.45■■□□□ 1.02
CALR3Q96L12 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CALR3Q96L12 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CALR3Q96L12 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CALR3Q96L12 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.45■■□□□ 1.02
CALR3Q96L12 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.45■■□□□ 1.02
CALR3Q96L12 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.45■■□□□ 1.02
CALR3Q96L12 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.45■■□□□ 1.02
CALR3Q96L12 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.45■■□□□ 1.02
CALR3Q96L12 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.45■■□□□ 1.02
CALR3Q96L12 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CALR3Q96L12 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CALR3Q96L12 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CALR3Q96L12 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CALR3Q96L12 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CALR3Q96L12 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CALR3Q96L12 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.44■■□□□ 1.02
CALR3Q96L12 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CALR3Q96L12 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CALR3Q96L12 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.44■■□□□ 1.02
CALR3Q96L12 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CALR3Q96L12 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CALR3Q96L12 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.44■■□□□ 1.02
CALR3Q96L12 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.44■■□□□ 1.02
CALR3Q96L12 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.44■■□□□ 1.02
CALR3Q96L12 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
CALR3Q96L12 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CALR3Q96L12 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CALR3Q96L12 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.44■■□□□ 1.02
CALR3Q96L12 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CALR3Q96L12 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CALR3Q96L12 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CALR3Q96L12 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CALR3Q96L12 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CALR3Q96L12 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
CALR3Q96L12 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CALR3Q96L12 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CALR3Q96L12 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.43■■□□□ 1.02
CALR3Q96L12 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CALR3Q96L12 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CALR3Q96L12 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.43■■□□□ 1.02
CALR3Q96L12 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CALR3Q96L12 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
CALR3Q96L12 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CALR3Q96L12 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CALR3Q96L12 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CALR3Q96L12 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CALR3Q96L12 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CALR3Q96L12 PGM5P4-201ENST00000421970 445 ntBASIC21.43■■□□□ 1.02
CALR3Q96L12 AC097381.1-201ENST00000429019 1296 ntBASIC21.43■■□□□ 1.02
CALR3Q96L12 CDV3P1-201ENST00000471403 739 ntBASIC21.43■■□□□ 1.02
CALR3Q96L12 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.43■■□□□ 1.02
CALR3Q96L12 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.43■■□□□ 1.02
CALR3Q96L12 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CALR3Q96L12 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CALR3Q96L12 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.43■■□□□ 1.02
CALR3Q96L12 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CALR3Q96L12 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CALR3Q96L12 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
CALR3Q96L12 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CALR3Q96L12 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
CALR3Q96L12 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CALR3Q96L12 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CALR3Q96L12 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CALR3Q96L12 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CALR3Q96L12 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.42■■□□□ 1.02
CALR3Q96L12 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.42■■□□□ 1.02
CALR3Q96L12 YBX1P1-201ENST00000445822 960 ntBASIC21.42■■□□□ 1.02
CALR3Q96L12 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.42■■□□□ 1.02
CALR3Q96L12 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CALR3Q96L12 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CALR3Q96L12 SMG8-203ENST00000578922 2178 ntBASIC21.42■■□□□ 1.02
CALR3Q96L12 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.42■■□□□ 1.02
CALR3Q96L12 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
CALR3Q96L12 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.41■■□□□ 1.02
CALR3Q96L12 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CALR3Q96L12 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CALR3Q96L12 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CALR3Q96L12 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CALR3Q96L12 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.41■■□□□ 1.02
CALR3Q96L12 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CALR3Q96L12 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CALR3Q96L12 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CALR3Q96L12 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.41■■□□□ 1.02
CALR3Q96L12 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CALR3Q96L12 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.41■■□□□ 1.02
CALR3Q96L12 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CALR3Q96L12 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
CALR3Q96L12 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CALR3Q96L12 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CALR3Q96L12 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CALR3Q96L12 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.4■■□□□ 1.02
CALR3Q96L12 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.4■■□□□ 1.02
CALR3Q96L12 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.4■■□□□ 1.02
CALR3Q96L12 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CALR3Q96L12 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CALR3Q96L12 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.4■■□□□ 1.02
CALR3Q96L12 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms