Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
SRFBP1Q8NEF9 CYP2T3P-201ENST00000601990 817 ntBASIC19.36■□□□□ 0.69
SRFBP1Q8NEF9 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.36■□□□□ 0.69
SRFBP1Q8NEF9 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SRFBP1Q8NEF9 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SRFBP1Q8NEF9 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SRFBP1Q8NEF9 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SRFBP1Q8NEF9 GABARAPL3-202ENST00000624044 1851 ntBASIC19.36■□□□□ 0.69
SRFBP1Q8NEF9 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SRFBP1Q8NEF9 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SRFBP1Q8NEF9 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SRFBP1Q8NEF9 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SRFBP1Q8NEF9 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.35■□□□□ 0.69
SRFBP1Q8NEF9 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SRFBP1Q8NEF9 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SRFBP1Q8NEF9 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SRFBP1Q8NEF9 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.35■□□□□ 0.69
SRFBP1Q8NEF9 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.35■□□□□ 0.69
SRFBP1Q8NEF9 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SRFBP1Q8NEF9 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SRFBP1Q8NEF9 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.35■□□□□ 0.69
SRFBP1Q8NEF9 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SRFBP1Q8NEF9 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.35■□□□□ 0.69
SRFBP1Q8NEF9 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.35■□□□□ 0.69
SRFBP1Q8NEF9 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SRFBP1Q8NEF9 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SRFBP1Q8NEF9 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SRFBP1Q8NEF9 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SRFBP1Q8NEF9 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.34■□□□□ 0.69
SRFBP1Q8NEF9 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SRFBP1Q8NEF9 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SRFBP1Q8NEF9 AP005212.1-201ENST00000581547 1997 ntBASIC19.34■□□□□ 0.69
SRFBP1Q8NEF9 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SRFBP1Q8NEF9 AC020907.5-201ENST00000624372 1936 ntBASIC19.34■□□□□ 0.69
SRFBP1Q8NEF9 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.34■□□□□ 0.69
SRFBP1Q8NEF9 CROCCP5-201ENST00000436658 830 ntBASIC19.34■□□□□ 0.69
SRFBP1Q8NEF9 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SRFBP1Q8NEF9 AL589743.5-201ENST00000616611 1050 ntBASIC19.34■□□□□ 0.69
SRFBP1Q8NEF9 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SRFBP1Q8NEF9 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.34■□□□□ 0.69
SRFBP1Q8NEF9 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SRFBP1Q8NEF9 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.34■□□□□ 0.69
SRFBP1Q8NEF9 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SRFBP1Q8NEF9 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SRFBP1Q8NEF9 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SRFBP1Q8NEF9 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
SRFBP1Q8NEF9 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
SRFBP1Q8NEF9 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SRFBP1Q8NEF9 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SRFBP1Q8NEF9 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
SRFBP1Q8NEF9 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
SRFBP1Q8NEF9 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.33■□□□□ 0.69
SRFBP1Q8NEF9 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SRFBP1Q8NEF9 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SRFBP1Q8NEF9 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.33■□□□□ 0.68
SRFBP1Q8NEF9 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.33■□□□□ 0.68
SRFBP1Q8NEF9 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SRFBP1Q8NEF9 AC105036.2-201ENST00000569468 176 ntBASIC19.33■□□□□ 0.68
SRFBP1Q8NEF9 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.33■□□□□ 0.68
SRFBP1Q8NEF9 AL121832.2-201ENST00000610979 668 ntBASIC19.33■□□□□ 0.68
SRFBP1Q8NEF9 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.33■□□□□ 0.68
SRFBP1Q8NEF9 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SRFBP1Q8NEF9 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
SRFBP1Q8NEF9 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SRFBP1Q8NEF9 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SRFBP1Q8NEF9 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
SRFBP1Q8NEF9 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SRFBP1Q8NEF9 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SRFBP1Q8NEF9 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SRFBP1Q8NEF9 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
SRFBP1Q8NEF9 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SRFBP1Q8NEF9 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SRFBP1Q8NEF9 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.32■□□□□ 0.68
SRFBP1Q8NEF9 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
SRFBP1Q8NEF9 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SRFBP1Q8NEF9 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SRFBP1Q8NEF9 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.32■□□□□ 0.68
SRFBP1Q8NEF9 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.32■□□□□ 0.68
SRFBP1Q8NEF9 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SRFBP1Q8NEF9 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SRFBP1Q8NEF9 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SRFBP1Q8NEF9 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.32■□□□□ 0.68
SRFBP1Q8NEF9 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SRFBP1Q8NEF9 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SRFBP1Q8NEF9 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SRFBP1Q8NEF9 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SRFBP1Q8NEF9 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.32■□□□□ 0.68
SRFBP1Q8NEF9 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.32■□□□□ 0.68
SRFBP1Q8NEF9 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.32■□□□□ 0.68
SRFBP1Q8NEF9 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.32■□□□□ 0.68
SRFBP1Q8NEF9 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.32■□□□□ 0.68
SRFBP1Q8NEF9 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.32■□□□□ 0.68
SRFBP1Q8NEF9 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.32■□□□□ 0.68
SRFBP1Q8NEF9 AC105020.6-201ENST00000621523 1217 ntBASIC19.32■□□□□ 0.68
SRFBP1Q8NEF9 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SRFBP1Q8NEF9 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
SRFBP1Q8NEF9 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SRFBP1Q8NEF9 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.32■□□□□ 0.68
SRFBP1Q8NEF9 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SRFBP1Q8NEF9 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms