Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
LSMEM1Q8N8F7 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LSMEM1Q8N8F7 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LSMEM1Q8N8F7 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.6■□□□□ 0.57
LSMEM1Q8N8F7 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LSMEM1Q8N8F7 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSMEM1Q8N8F7 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSMEM1Q8N8F7 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LSMEM1Q8N8F7 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSMEM1Q8N8F7 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSMEM1Q8N8F7 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.59■□□□□ 0.57
LSMEM1Q8N8F7 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSMEM1Q8N8F7 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LSMEM1Q8N8F7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSMEM1Q8N8F7 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.59■□□□□ 0.57
LSMEM1Q8N8F7 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.59■□□□□ 0.57
LSMEM1Q8N8F7 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.59■□□□□ 0.57
LSMEM1Q8N8F7 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LSMEM1Q8N8F7 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.59■□□□□ 0.57
LSMEM1Q8N8F7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
LSMEM1Q8N8F7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
LSMEM1Q8N8F7 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.59■□□□□ 0.57
LSMEM1Q8N8F7 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSMEM1Q8N8F7 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSMEM1Q8N8F7 AC026471.1-201ENST00000564629 3026 ntBASIC18.59■□□□□ 0.57
LSMEM1Q8N8F7 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSMEM1Q8N8F7 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSMEM1Q8N8F7 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSMEM1Q8N8F7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSMEM1Q8N8F7 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSMEM1Q8N8F7 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
LSMEM1Q8N8F7 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LSMEM1Q8N8F7 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.58■□□□□ 0.57
LSMEM1Q8N8F7 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
LSMEM1Q8N8F7 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LSMEM1Q8N8F7 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.58■□□□□ 0.57
LSMEM1Q8N8F7 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.58■□□□□ 0.57
LSMEM1Q8N8F7 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
LSMEM1Q8N8F7 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LSMEM1Q8N8F7 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LSMEM1Q8N8F7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.58■□□□□ 0.56
LSMEM1Q8N8F7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.58■□□□□ 0.56
LSMEM1Q8N8F7 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
LSMEM1Q8N8F7 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.58■□□□□ 0.56
LSMEM1Q8N8F7 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.58■□□□□ 0.56
LSMEM1Q8N8F7 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LSMEM1Q8N8F7 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
LSMEM1Q8N8F7 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.58■□□□□ 0.56
LSMEM1Q8N8F7 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LSMEM1Q8N8F7 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.58■□□□□ 0.56
LSMEM1Q8N8F7 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LSMEM1Q8N8F7 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
LSMEM1Q8N8F7 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
LSMEM1Q8N8F7 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
LSMEM1Q8N8F7 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
LSMEM1Q8N8F7 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LSMEM1Q8N8F7 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.58■□□□□ 0.56
LSMEM1Q8N8F7 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
LSMEM1Q8N8F7 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
LSMEM1Q8N8F7 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LSMEM1Q8N8F7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.57■□□□□ 0.56
LSMEM1Q8N8F7 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.57■□□□□ 0.56
LSMEM1Q8N8F7 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.57■□□□□ 0.56
LSMEM1Q8N8F7 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LSMEM1Q8N8F7 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.57■□□□□ 0.56
LSMEM1Q8N8F7 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LSMEM1Q8N8F7 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LSMEM1Q8N8F7 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LSMEM1Q8N8F7 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.57■□□□□ 0.56
LSMEM1Q8N8F7 AC137761.2-201ENST00000561729 223 ntBASIC18.57■□□□□ 0.56
LSMEM1Q8N8F7 RARRES2P6-201ENST00000567333 442 ntBASIC18.57■□□□□ 0.56
LSMEM1Q8N8F7 AC145350.3-201ENST00000569033 163 ntBASIC18.57■□□□□ 0.56
LSMEM1Q8N8F7 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.57■□□□□ 0.56
LSMEM1Q8N8F7 AC013268.1-206ENST00000638368 961 ntBASIC18.57■□□□□ 0.56
LSMEM1Q8N8F7 AC112229.1-201ENST00000639295 961 ntBASIC18.57■□□□□ 0.56
LSMEM1Q8N8F7 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.57■□□□□ 0.56
LSMEM1Q8N8F7 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.57■□□□□ 0.56
LSMEM1Q8N8F7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LSMEM1Q8N8F7 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
LSMEM1Q8N8F7 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LSMEM1Q8N8F7 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LSMEM1Q8N8F7 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LSMEM1Q8N8F7 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LSMEM1Q8N8F7 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
LSMEM1Q8N8F7 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LSMEM1Q8N8F7 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LSMEM1Q8N8F7 AL020996.1-203ENST00000536896 2307 ntBASIC18.56■□□□□ 0.56
LSMEM1Q8N8F7 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.56■□□□□ 0.56
LSMEM1Q8N8F7 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LSMEM1Q8N8F7 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
LSMEM1Q8N8F7 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LSMEM1Q8N8F7 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.56■□□□□ 0.56
LSMEM1Q8N8F7 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.56■□□□□ 0.56
LSMEM1Q8N8F7 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LSMEM1Q8N8F7 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LSMEM1Q8N8F7 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.56■□□□□ 0.56
LSMEM1Q8N8F7 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LSMEM1Q8N8F7 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LSMEM1Q8N8F7 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
LSMEM1Q8N8F7 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms