Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDKL3Q8IVW4 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDKL3Q8IVW4 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.87■□□□□ 0.93
CDKL3Q8IVW4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.87■□□□□ 0.93
CDKL3Q8IVW4 PGM5P4-201ENST00000421970 445 ntBASIC20.87■□□□□ 0.93
CDKL3Q8IVW4 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.87■□□□□ 0.93
CDKL3Q8IVW4 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.87■□□□□ 0.93
CDKL3Q8IVW4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDKL3Q8IVW4 AC007322.4-201ENST00000509611 723 ntBASIC20.87■□□□□ 0.93
CDKL3Q8IVW4 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.87■□□□□ 0.93
CDKL3Q8IVW4 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
CDKL3Q8IVW4 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CDKL3Q8IVW4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDKL3Q8IVW4 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDKL3Q8IVW4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDKL3Q8IVW4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDKL3Q8IVW4 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDKL3Q8IVW4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
CDKL3Q8IVW4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDKL3Q8IVW4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
CDKL3Q8IVW4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.86■□□□□ 0.93
CDKL3Q8IVW4 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDKL3Q8IVW4 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDKL3Q8IVW4 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDKL3Q8IVW4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDKL3Q8IVW4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.86■□□□□ 0.93
CDKL3Q8IVW4 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDKL3Q8IVW4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.86■□□□□ 0.93
CDKL3Q8IVW4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CDKL3Q8IVW4 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CDKL3Q8IVW4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDKL3Q8IVW4 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CDKL3Q8IVW4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.86■□□□□ 0.93
CDKL3Q8IVW4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDKL3Q8IVW4 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
CDKL3Q8IVW4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDKL3Q8IVW4 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDKL3Q8IVW4 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDKL3Q8IVW4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDKL3Q8IVW4 AL391422.3-201ENST00000603791 2761 ntBASIC20.85■□□□□ 0.93
CDKL3Q8IVW4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
CDKL3Q8IVW4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDKL3Q8IVW4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDKL3Q8IVW4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.85■□□□□ 0.93
CDKL3Q8IVW4 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDKL3Q8IVW4 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDKL3Q8IVW4 AL162412.1-201ENST00000567129 965 ntBASIC20.85■□□□□ 0.93
CDKL3Q8IVW4 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.85■□□□□ 0.93
CDKL3Q8IVW4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDKL3Q8IVW4 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CDKL3Q8IVW4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.85■□□□□ 0.93
CDKL3Q8IVW4 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDKL3Q8IVW4 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDKL3Q8IVW4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDKL3Q8IVW4 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDKL3Q8IVW4 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
CDKL3Q8IVW4 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDKL3Q8IVW4 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.84■□□□□ 0.93
CDKL3Q8IVW4 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CDKL3Q8IVW4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.84■□□□□ 0.93
CDKL3Q8IVW4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CDKL3Q8IVW4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDKL3Q8IVW4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDKL3Q8IVW4 AC016769.1-201ENST00000409132 1010 ntBASIC20.84■□□□□ 0.93
CDKL3Q8IVW4 AC026271.2-201ENST00000428091 497 ntBASIC20.84■□□□□ 0.93
CDKL3Q8IVW4 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CDKL3Q8IVW4 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.84■□□□□ 0.93
CDKL3Q8IVW4 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.84■□□□□ 0.93
CDKL3Q8IVW4 RARRES2P6-201ENST00000567333 442 ntBASIC20.84■□□□□ 0.93
CDKL3Q8IVW4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.84■□□□□ 0.93
CDKL3Q8IVW4 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDKL3Q8IVW4 AC087633.2-202ENST00000565166 1439 ntBASIC20.84■□□□□ 0.93
CDKL3Q8IVW4 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDKL3Q8IVW4 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CDKL3Q8IVW4 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDKL3Q8IVW4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDKL3Q8IVW4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDKL3Q8IVW4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CDKL3Q8IVW4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.83■□□□□ 0.93
CDKL3Q8IVW4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDKL3Q8IVW4 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.83■□□□□ 0.93
CDKL3Q8IVW4 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
CDKL3Q8IVW4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDKL3Q8IVW4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CDKL3Q8IVW4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.83■□□□□ 0.93
CDKL3Q8IVW4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDKL3Q8IVW4 MFSD11-216ENST00000590393 1141 ntBASIC20.83■□□□□ 0.93
CDKL3Q8IVW4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
CDKL3Q8IVW4 SMG8-203ENST00000578922 2178 ntBASIC20.83■□□□□ 0.92
CDKL3Q8IVW4 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDKL3Q8IVW4 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
CDKL3Q8IVW4 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDKL3Q8IVW4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDKL3Q8IVW4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDKL3Q8IVW4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDKL3Q8IVW4 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CDKL3Q8IVW4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDKL3Q8IVW4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
CDKL3Q8IVW4 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CDKL3Q8IVW4 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms