Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CASC4Q6P4E1 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.67■□□□□ 0.9
CASC4Q6P4E1 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CASC4Q6P4E1 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.67■□□□□ 0.9
CASC4Q6P4E1 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.67■□□□□ 0.9
CASC4Q6P4E1 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.67■□□□□ 0.9
CASC4Q6P4E1 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CASC4Q6P4E1 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.67■□□□□ 0.9
CASC4Q6P4E1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.67■□□□□ 0.9
CASC4Q6P4E1 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CASC4Q6P4E1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.67■□□□□ 0.9
CASC4Q6P4E1 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CASC4Q6P4E1 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.67■□□□□ 0.9
CASC4Q6P4E1 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CASC4Q6P4E1 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CASC4Q6P4E1 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.67■□□□□ 0.9
CASC4Q6P4E1 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.66■□□□□ 0.9
CASC4Q6P4E1 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CASC4Q6P4E1 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CASC4Q6P4E1 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.66■□□□□ 0.9
CASC4Q6P4E1 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.66■□□□□ 0.9
CASC4Q6P4E1 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CASC4Q6P4E1 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CASC4Q6P4E1 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
CASC4Q6P4E1 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.66■□□□□ 0.9
CASC4Q6P4E1 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CASC4Q6P4E1 KRT19P1-201ENST00000405746 1186 ntBASIC20.66■□□□□ 0.9
CASC4Q6P4E1 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CASC4Q6P4E1 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.66■□□□□ 0.9
CASC4Q6P4E1 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.66■□□□□ 0.9
CASC4Q6P4E1 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.66■□□□□ 0.9
CASC4Q6P4E1 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.66■□□□□ 0.9
CASC4Q6P4E1 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.66■□□□□ 0.9
CASC4Q6P4E1 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.66■□□□□ 0.9
CASC4Q6P4E1 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CASC4Q6P4E1 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CASC4Q6P4E1 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CASC4Q6P4E1 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CASC4Q6P4E1 AL162377.1-201ENST00000618844 1793 ntBASIC20.66■□□□□ 0.9
CASC4Q6P4E1 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.66■□□□□ 0.9
CASC4Q6P4E1 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.66■□□□□ 0.9
CASC4Q6P4E1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.66■□□□□ 0.9
CASC4Q6P4E1 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.66■□□□□ 0.9
CASC4Q6P4E1 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CASC4Q6P4E1 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
CASC4Q6P4E1 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.65■□□□□ 0.9
CASC4Q6P4E1 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CASC4Q6P4E1 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CASC4Q6P4E1 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CASC4Q6P4E1 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CASC4Q6P4E1 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CASC4Q6P4E1 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CASC4Q6P4E1 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CASC4Q6P4E1 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CASC4Q6P4E1 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CASC4Q6P4E1 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CASC4Q6P4E1 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.65■□□□□ 0.9
CASC4Q6P4E1 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CASC4Q6P4E1 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CASC4Q6P4E1 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.65■□□□□ 0.9
CASC4Q6P4E1 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.65■□□□□ 0.9
CASC4Q6P4E1 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CASC4Q6P4E1 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.9
CASC4Q6P4E1 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.9
CASC4Q6P4E1 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CASC4Q6P4E1 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
CASC4Q6P4E1 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CASC4Q6P4E1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.64■□□□□ 0.89
CASC4Q6P4E1 AFG3L1P-217ENST00000557444 2447 ntBASIC20.64■□□□□ 0.89
CASC4Q6P4E1 RBM17P2-201ENST00000616397 1405 ntBASIC20.64■□□□□ 0.89
CASC4Q6P4E1 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CASC4Q6P4E1 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CASC4Q6P4E1 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CASC4Q6P4E1 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CASC4Q6P4E1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.64■□□□□ 0.89
CASC4Q6P4E1 MIR2861-201ENST00000636310 90 ntBASIC20.64■□□□□ 0.89
CASC4Q6P4E1 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CASC4Q6P4E1 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.64■□□□□ 0.89
CASC4Q6P4E1 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CASC4Q6P4E1 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CASC4Q6P4E1 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.63■□□□□ 0.89
CASC4Q6P4E1 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CASC4Q6P4E1 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CASC4Q6P4E1 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
CASC4Q6P4E1 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CASC4Q6P4E1 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.63■□□□□ 0.89
CASC4Q6P4E1 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CASC4Q6P4E1 AC099778.1-201ENST00000568593 1911 ntBASIC20.63■□□□□ 0.89
CASC4Q6P4E1 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CASC4Q6P4E1 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CASC4Q6P4E1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.63■□□□□ 0.89
CASC4Q6P4E1 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CASC4Q6P4E1 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.63■□□□□ 0.89
CASC4Q6P4E1 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CASC4Q6P4E1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.63■□□□□ 0.89
CASC4Q6P4E1 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.63■□□□□ 0.89
CASC4Q6P4E1 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CASC4Q6P4E1 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CASC4Q6P4E1 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CASC4Q6P4E1 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms