Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SWSAP1Q6NVH7 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
SWSAP1Q6NVH7 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
SWSAP1Q6NVH7 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
SWSAP1Q6NVH7 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SWSAP1Q6NVH7 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
SWSAP1Q6NVH7 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
SWSAP1Q6NVH7 AL121603.2-201ENST00000557373 2117 ntBASIC22.68■■□□□ 1.22
SWSAP1Q6NVH7 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
SWSAP1Q6NVH7 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SWSAP1Q6NVH7 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SWSAP1Q6NVH7 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SWSAP1Q6NVH7 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC22.68■■□□□ 1.22
SWSAP1Q6NVH7 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC22.68■■□□□ 1.22
SWSAP1Q6NVH7 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SWSAP1Q6NVH7 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SWSAP1Q6NVH7 AC007375.3-201ENST00000600936 2314 ntBASIC22.68■■□□□ 1.22
SWSAP1Q6NVH7 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SWSAP1Q6NVH7 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC22.67■■□□□ 1.22
SWSAP1Q6NVH7 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC22.67■■□□□ 1.22
SWSAP1Q6NVH7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC22.67■■□□□ 1.22
SWSAP1Q6NVH7 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SWSAP1Q6NVH7 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SWSAP1Q6NVH7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SWSAP1Q6NVH7 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SWSAP1Q6NVH7 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SWSAP1Q6NVH7 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SWSAP1Q6NVH7 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
SWSAP1Q6NVH7 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC22.67■■□□□ 1.22
SWSAP1Q6NVH7 IRX5-204ENST00000560154 879 ntTSL 5 BASIC22.67■■□□□ 1.22
SWSAP1Q6NVH7 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SWSAP1Q6NVH7 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SWSAP1Q6NVH7 MOK-233ENST00000524214 1539 ntTSL 2 BASIC22.67■■□□□ 1.22
SWSAP1Q6NVH7 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
SWSAP1Q6NVH7 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC22.66■■□□□ 1.22
SWSAP1Q6NVH7 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC22.66■■□□□ 1.22
SWSAP1Q6NVH7 AC006128.1-201ENST00000624704 1661 ntBASIC22.66■■□□□ 1.22
SWSAP1Q6NVH7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SWSAP1Q6NVH7 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SWSAP1Q6NVH7 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SWSAP1Q6NVH7 GGT1-206ENST00000404223 952 ntTSL 2 BASIC22.66■■□□□ 1.22
SWSAP1Q6NVH7 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC22.66■■□□□ 1.22
SWSAP1Q6NVH7 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC22.66■■□□□ 1.22
SWSAP1Q6NVH7 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC22.66■■□□□ 1.22
SWSAP1Q6NVH7 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SWSAP1Q6NVH7 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC22.66■■□□□ 1.22
SWSAP1Q6NVH7 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SWSAP1Q6NVH7 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC22.66■■□□□ 1.22
SWSAP1Q6NVH7 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SWSAP1Q6NVH7 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
SWSAP1Q6NVH7 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC22.66■■□□□ 1.22
SWSAP1Q6NVH7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SWSAP1Q6NVH7 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SWSAP1Q6NVH7 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SWSAP1Q6NVH7 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
SWSAP1Q6NVH7 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC22.65■■□□□ 1.22
SWSAP1Q6NVH7 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
SWSAP1Q6NVH7 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SWSAP1Q6NVH7 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SWSAP1Q6NVH7 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SWSAP1Q6NVH7 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC22.65■■□□□ 1.22
SWSAP1Q6NVH7 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC22.65■■□□□ 1.22
SWSAP1Q6NVH7 AC098590.1-201ENST00000468126 897 ntBASIC22.65■■□□□ 1.22
SWSAP1Q6NVH7 AC005829.2-201ENST00000571422 1056 ntBASIC22.65■■□□□ 1.22
SWSAP1Q6NVH7 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC22.65■■□□□ 1.22
SWSAP1Q6NVH7 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC22.65■■□□□ 1.22
SWSAP1Q6NVH7 MMD2-204ENST00000612910 778 ntTSL 5 BASIC22.65■■□□□ 1.22
SWSAP1Q6NVH7 AC006557.6-201ENST00000623071 864 ntBASIC22.65■■□□□ 1.22
SWSAP1Q6NVH7 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC22.65■■□□□ 1.22
SWSAP1Q6NVH7 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
SWSAP1Q6NVH7 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC22.65■■□□□ 1.22
SWSAP1Q6NVH7 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
SWSAP1Q6NVH7 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.65■■□□□ 1.22
SWSAP1Q6NVH7 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
SWSAP1Q6NVH7 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SWSAP1Q6NVH7 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SWSAP1Q6NVH7 FP700111.2-201ENST00000619190 1892 ntBASIC22.64■■□□□ 1.22
SWSAP1Q6NVH7 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC22.64■■□□□ 1.22
SWSAP1Q6NVH7 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC22.64■■□□□ 1.22
SWSAP1Q6NVH7 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC22.64■■□□□ 1.21
SWSAP1Q6NVH7 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC22.64■■□□□ 1.21
SWSAP1Q6NVH7 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SWSAP1Q6NVH7 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC22.64■■□□□ 1.21
SWSAP1Q6NVH7 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SWSAP1Q6NVH7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
SWSAP1Q6NVH7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
SWSAP1Q6NVH7 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SWSAP1Q6NVH7 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC22.63■■□□□ 1.21
SWSAP1Q6NVH7 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SWSAP1Q6NVH7 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SWSAP1Q6NVH7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC22.63■■□□□ 1.21
SWSAP1Q6NVH7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC22.63■■□□□ 1.21
SWSAP1Q6NVH7 AC066615.1-201ENST00000640911 628 ntBASIC22.63■■□□□ 1.21
SWSAP1Q6NVH7 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SWSAP1Q6NVH7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
SWSAP1Q6NVH7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC22.63■■□□□ 1.21
SWSAP1Q6NVH7 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SWSAP1Q6NVH7 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SWSAP1Q6NVH7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
SWSAP1Q6NVH7 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms