Protein–RNA interactions for Protein: Q5T9S5

CCDC18, Coiled-coil domain-containing protein 18, humanhuman

Predictions only

Length 1,454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18Q5T9S5 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC31.63■■■□□ 2.65
CCDC18Q5T9S5 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC31.63■■■□□ 2.65
CCDC18Q5T9S5 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC31.63■■■□□ 2.65
CCDC18Q5T9S5 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC31.63■■■□□ 2.65
CCDC18Q5T9S5 MIR4785-201ENST00000585005 73 ntBASIC31.63■■■□□ 2.65
CCDC18Q5T9S5 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC31.63■■■□□ 2.65
CCDC18Q5T9S5 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC31.63■■■□□ 2.65
CCDC18Q5T9S5 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
CCDC18Q5T9S5 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC31.63■■■□□ 2.65
CCDC18Q5T9S5 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
CCDC18Q5T9S5 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC31.63■■■□□ 2.65
CCDC18Q5T9S5 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC31.62■■■□□ 2.65
CCDC18Q5T9S5 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CCDC18Q5T9S5 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC31.62■■■□□ 2.65
CCDC18Q5T9S5 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC31.62■■■□□ 2.65
CCDC18Q5T9S5 AL121906.2-201ENST00000621597 723 ntBASIC31.62■■■□□ 2.65
CCDC18Q5T9S5 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CCDC18Q5T9S5 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CCDC18Q5T9S5 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC31.62■■■□□ 2.65
CCDC18Q5T9S5 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC31.61■■■□□ 2.65
CCDC18Q5T9S5 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC31.61■■■□□ 2.65
CCDC18Q5T9S5 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC31.61■■■□□ 2.65
CCDC18Q5T9S5 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
CCDC18Q5T9S5 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC31.61■■■□□ 2.65
CCDC18Q5T9S5 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC31.61■■■□□ 2.65
CCDC18Q5T9S5 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
CCDC18Q5T9S5 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CCDC18Q5T9S5 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC31.61■■■□□ 2.65
CCDC18Q5T9S5 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
CCDC18Q5T9S5 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CCDC18Q5T9S5 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC31.61■■■□□ 2.65
CCDC18Q5T9S5 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC31.61■■■□□ 2.65
CCDC18Q5T9S5 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
CCDC18Q5T9S5 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
CCDC18Q5T9S5 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC31.6■■■□□ 2.65
CCDC18Q5T9S5 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
CCDC18Q5T9S5 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
CCDC18Q5T9S5 TREX2-204ENST00000370212 861 ntTSL 5 BASIC31.6■■■□□ 2.65
CCDC18Q5T9S5 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC31.6■■■□□ 2.65
CCDC18Q5T9S5 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC31.6■■■□□ 2.65
CCDC18Q5T9S5 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC31.6■■■□□ 2.65
CCDC18Q5T9S5 TK2-204ENST00000525974 1178 ntTSL 2 BASIC31.6■■■□□ 2.65
CCDC18Q5T9S5 AP001412.1-201ENST00000608405 714 ntBASIC31.6■■■□□ 2.65
CCDC18Q5T9S5 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC31.6■■■□□ 2.65
CCDC18Q5T9S5 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
CCDC18Q5T9S5 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC31.6■■■□□ 2.65
CCDC18Q5T9S5 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC31.6■■■□□ 2.65
CCDC18Q5T9S5 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CCDC18Q5T9S5 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC31.59■■■□□ 2.65
CCDC18Q5T9S5 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC31.59■■■□□ 2.65
CCDC18Q5T9S5 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC31.59■■■□□ 2.65
CCDC18Q5T9S5 PRKY-204ENST00000533551 1019 ntBASIC31.59■■■□□ 2.65
CCDC18Q5T9S5 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CCDC18Q5T9S5 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC31.59■■■□□ 2.65
CCDC18Q5T9S5 PTBP1P-201ENST00000554374 1601 ntBASIC31.59■■■□□ 2.65
CCDC18Q5T9S5 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CCDC18Q5T9S5 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CCDC18Q5T9S5 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CCDC18Q5T9S5 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CCDC18Q5T9S5 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC31.59■■■□□ 2.65
CCDC18Q5T9S5 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CCDC18Q5T9S5 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CCDC18Q5T9S5 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC31.59■■■□□ 2.65
CCDC18Q5T9S5 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC31.59■■■□□ 2.65
CCDC18Q5T9S5 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC31.59■■■□□ 2.65
CCDC18Q5T9S5 SNX21-213ENST00000614929 587 ntTSL 5 BASIC31.59■■■□□ 2.65
CCDC18Q5T9S5 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC31.58■■■□□ 2.65
CCDC18Q5T9S5 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
CCDC18Q5T9S5 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CCDC18Q5T9S5 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC31.58■■■□□ 2.65
CCDC18Q5T9S5 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC31.58■■■□□ 2.65
CCDC18Q5T9S5 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC31.58■■■□□ 2.65
CCDC18Q5T9S5 PENK-204ENST00000518770 863 ntTSL 2 BASIC31.58■■■□□ 2.65
CCDC18Q5T9S5 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC31.58■■■□□ 2.65
CCDC18Q5T9S5 AL117328.2-201ENST00000624617 1940 ntBASIC31.58■■■□□ 2.65
CCDC18Q5T9S5 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CCDC18Q5T9S5 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC31.57■■■□□ 2.64
CCDC18Q5T9S5 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC31.57■■■□□ 2.64
CCDC18Q5T9S5 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
CCDC18Q5T9S5 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
CCDC18Q5T9S5 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CCDC18Q5T9S5 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC31.57■■■□□ 2.64
CCDC18Q5T9S5 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC31.57■■■□□ 2.64
CCDC18Q5T9S5 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC31.57■■■□□ 2.64
CCDC18Q5T9S5 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC31.57■■■□□ 2.64
CCDC18Q5T9S5 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
CCDC18Q5T9S5 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC31.57■■■□□ 2.64
CCDC18Q5T9S5 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC31.57■■■□□ 2.64
CCDC18Q5T9S5 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC31.56■■■□□ 2.64
CCDC18Q5T9S5 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC31.56■■■□□ 2.64
CCDC18Q5T9S5 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
CCDC18Q5T9S5 AC124283.5-201ENST00000624661 1809 ntBASIC31.56■■■□□ 2.64
CCDC18Q5T9S5 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC31.56■■■□□ 2.64
CCDC18Q5T9S5 AL355075.4-201ENST00000554988 638 ntBASIC31.56■■■□□ 2.64
CCDC18Q5T9S5 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
CCDC18Q5T9S5 GRAP-204ENST00000573099 846 ntTSL 3 BASIC31.56■■■□□ 2.64
CCDC18Q5T9S5 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC31.56■■■□□ 2.64
CCDC18Q5T9S5 LINC01023-201ENST00000606054 436 ntBASIC31.56■■■□□ 2.64
CCDC18Q5T9S5 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC31.56■■■□□ 2.64
CCDC18Q5T9S5 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC31.56■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms