Protein–RNA interactions for Protein: Q5SQS7

SH2D4B, SH2 domain-containing protein 4B, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4BQ5SQS7 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
SH2D4BQ5SQS7 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
SH2D4BQ5SQS7 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SH2D4BQ5SQS7 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SH2D4BQ5SQS7 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SH2D4BQ5SQS7 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SH2D4BQ5SQS7 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
SH2D4BQ5SQS7 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
SH2D4BQ5SQS7 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.06■□□□□ 0.8
SH2D4BQ5SQS7 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.06■□□□□ 0.8
SH2D4BQ5SQS7 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SH2D4BQ5SQS7 AC005837.3-201ENST00000612163 286 ntBASIC20.06■□□□□ 0.8
SH2D4BQ5SQS7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.06■□□□□ 0.8
SH2D4BQ5SQS7 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.06■□□□□ 0.8
SH2D4BQ5SQS7 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
SH2D4BQ5SQS7 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.06■□□□□ 0.8
SH2D4BQ5SQS7 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SH2D4BQ5SQS7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SH2D4BQ5SQS7 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SH2D4BQ5SQS7 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SH2D4BQ5SQS7 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SH2D4BQ5SQS7 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SH2D4BQ5SQS7 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.05■□□□□ 0.8
SH2D4BQ5SQS7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.05■□□□□ 0.8
SH2D4BQ5SQS7 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SH2D4BQ5SQS7 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SH2D4BQ5SQS7 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SH2D4BQ5SQS7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SH2D4BQ5SQS7 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SH2D4BQ5SQS7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.05■□□□□ 0.8
SH2D4BQ5SQS7 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.05■□□□□ 0.8
SH2D4BQ5SQS7 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.05■□□□□ 0.8
SH2D4BQ5SQS7 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.05■□□□□ 0.8
SH2D4BQ5SQS7 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SH2D4BQ5SQS7 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SH2D4BQ5SQS7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SH2D4BQ5SQS7 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SH2D4BQ5SQS7 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SH2D4BQ5SQS7 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SH2D4BQ5SQS7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
SH2D4BQ5SQS7 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SH2D4BQ5SQS7 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SH2D4BQ5SQS7 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SH2D4BQ5SQS7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SH2D4BQ5SQS7 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SH2D4BQ5SQS7 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SH2D4BQ5SQS7 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.04■□□□□ 0.8
SH2D4BQ5SQS7 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.04■□□□□ 0.8
SH2D4BQ5SQS7 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SH2D4BQ5SQS7 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SH2D4BQ5SQS7 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SH2D4BQ5SQS7 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SH2D4BQ5SQS7 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.04■□□□□ 0.8
SH2D4BQ5SQS7 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.04■□□□□ 0.8
SH2D4BQ5SQS7 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.04■□□□□ 0.8
SH2D4BQ5SQS7 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SH2D4BQ5SQS7 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.04■□□□□ 0.8
SH2D4BQ5SQS7 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SH2D4BQ5SQS7 SUDS3P1-201ENST00000505831 966 ntBASIC20.04■□□□□ 0.8
SH2D4BQ5SQS7 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.04■□□□□ 0.8
SH2D4BQ5SQS7 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SH2D4BQ5SQS7 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.04■□□□□ 0.8
SH2D4BQ5SQS7 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SH2D4BQ5SQS7 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SH2D4BQ5SQS7 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
SH2D4BQ5SQS7 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
SH2D4BQ5SQS7 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SH2D4BQ5SQS7 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SH2D4BQ5SQS7 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SH2D4BQ5SQS7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SH2D4BQ5SQS7 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SH2D4BQ5SQS7 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.04■□□□□ 0.8
SH2D4BQ5SQS7 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SH2D4BQ5SQS7 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SH2D4BQ5SQS7 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.03■□□□□ 0.8
SH2D4BQ5SQS7 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SH2D4BQ5SQS7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.03■□□□□ 0.8
SH2D4BQ5SQS7 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SH2D4BQ5SQS7 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SH2D4BQ5SQS7 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SH2D4BQ5SQS7 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.03■□□□□ 0.8
SH2D4BQ5SQS7 MIR638-201ENST00000385237 100 ntBASIC20.03■□□□□ 0.8
SH2D4BQ5SQS7 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.03■□□□□ 0.8
SH2D4BQ5SQS7 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.03■□□□□ 0.8
SH2D4BQ5SQS7 AC012414.1-201ENST00000556676 535 ntBASIC20.03■□□□□ 0.8
SH2D4BQ5SQS7 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SH2D4BQ5SQS7 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SH2D4BQ5SQS7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SH2D4BQ5SQS7 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.03■□□□□ 0.8
SH2D4BQ5SQS7 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SH2D4BQ5SQS7 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SH2D4BQ5SQS7 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SH2D4BQ5SQS7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SH2D4BQ5SQS7 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.03■□□□□ 0.8
SH2D4BQ5SQS7 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SH2D4BQ5SQS7 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SH2D4BQ5SQS7 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.03■□□□□ 0.8
SH2D4BQ5SQS7 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SH2D4BQ5SQS7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SH2D4BQ5SQS7 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms