Protein–RNA interactions for Protein: Q5NE16

CTSL3P, Putative inactive cathepsin L-like protein CTSL3P, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL3PQ5NE16 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTSL3PQ5NE16 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTSL3PQ5NE16 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.06■□□□□ 0.8
CTSL3PQ5NE16 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTSL3PQ5NE16 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTSL3PQ5NE16 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTSL3PQ5NE16 MCRIP2P1-201ENST00000394346 511 ntBASIC20.06■□□□□ 0.8
CTSL3PQ5NE16 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.06■□□□□ 0.8
CTSL3PQ5NE16 PGM5P4-201ENST00000421970 445 ntBASIC20.06■□□□□ 0.8
CTSL3PQ5NE16 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
CTSL3PQ5NE16 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CTSL3PQ5NE16 AC093787.1-201ENST00000450396 207 ntBASIC20.06■□□□□ 0.8
CTSL3PQ5NE16 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CTSL3PQ5NE16 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CTSL3PQ5NE16 SMG8-203ENST00000578922 2178 ntBASIC20.06■□□□□ 0.8
CTSL3PQ5NE16 AL050303.2-201ENST00000619798 666 ntBASIC20.06■□□□□ 0.8
CTSL3PQ5NE16 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTSL3PQ5NE16 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CTSL3PQ5NE16 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CTSL3PQ5NE16 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CTSL3PQ5NE16 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTSL3PQ5NE16 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CTSL3PQ5NE16 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTSL3PQ5NE16 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTSL3PQ5NE16 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
CTSL3PQ5NE16 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTSL3PQ5NE16 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.06■□□□□ 0.8
CTSL3PQ5NE16 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.05■□□□□ 0.8
CTSL3PQ5NE16 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTSL3PQ5NE16 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTSL3PQ5NE16 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CTSL3PQ5NE16 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
CTSL3PQ5NE16 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
CTSL3PQ5NE16 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CTSL3PQ5NE16 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTSL3PQ5NE16 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTSL3PQ5NE16 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CTSL3PQ5NE16 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CTSL3PQ5NE16 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.05■□□□□ 0.8
CTSL3PQ5NE16 AL355472.2-201ENST00000422958 438 ntBASIC20.05■□□□□ 0.8
CTSL3PQ5NE16 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CTSL3PQ5NE16 OR10C1-204ENST00000622521 1039 ntBASIC20.05■□□□□ 0.8
CTSL3PQ5NE16 AC008694.1-202ENST00000636953 945 ntBASIC20.05■□□□□ 0.8
CTSL3PQ5NE16 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CTSL3PQ5NE16 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CTSL3PQ5NE16 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.04■□□□□ 0.8
CTSL3PQ5NE16 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTSL3PQ5NE16 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.04■□□□□ 0.8
CTSL3PQ5NE16 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.04■□□□□ 0.8
CTSL3PQ5NE16 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CTSL3PQ5NE16 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTSL3PQ5NE16 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.04■□□□□ 0.8
CTSL3PQ5NE16 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.04■□□□□ 0.8
CTSL3PQ5NE16 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTSL3PQ5NE16 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTSL3PQ5NE16 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.04■□□□□ 0.8
CTSL3PQ5NE16 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.04■□□□□ 0.8
CTSL3PQ5NE16 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CTSL3PQ5NE16 AL391422.3-201ENST00000603791 2761 ntBASIC20.04■□□□□ 0.8
CTSL3PQ5NE16 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.04■□□□□ 0.8
CTSL3PQ5NE16 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTSL3PQ5NE16 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTSL3PQ5NE16 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTSL3PQ5NE16 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.04■□□□□ 0.8
CTSL3PQ5NE16 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTSL3PQ5NE16 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.04■□□□□ 0.8
CTSL3PQ5NE16 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTSL3PQ5NE16 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTSL3PQ5NE16 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.03■□□□□ 0.8
CTSL3PQ5NE16 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTSL3PQ5NE16 AC010980.2-201ENST00000587099 1412 ntBASIC20.03■□□□□ 0.8
CTSL3PQ5NE16 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.03■□□□□ 0.8
CTSL3PQ5NE16 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CTSL3PQ5NE16 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.03■□□□□ 0.8
CTSL3PQ5NE16 MIR663A-201ENST00000385250 93 ntBASIC20.03■□□□□ 0.8
CTSL3PQ5NE16 AC026185.1-201ENST00000445748 174 ntBASIC20.03■□□□□ 0.8
CTSL3PQ5NE16 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.03■□□□□ 0.8
CTSL3PQ5NE16 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.03■□□□□ 0.8
CTSL3PQ5NE16 CYP2T3P-201ENST00000601990 817 ntBASIC20.03■□□□□ 0.8
CTSL3PQ5NE16 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.03■□□□□ 0.8
CTSL3PQ5NE16 AC099778.1-201ENST00000568593 1911 ntBASIC20.03■□□□□ 0.8
CTSL3PQ5NE16 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTSL3PQ5NE16 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.03■□□□□ 0.8
CTSL3PQ5NE16 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CTSL3PQ5NE16 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.03■□□□□ 0.8
CTSL3PQ5NE16 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.03■□□□□ 0.8
CTSL3PQ5NE16 DPP3P2-201ENST00000416030 1696 ntBASIC20.03■□□□□ 0.8
CTSL3PQ5NE16 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.03■□□□□ 0.8
CTSL3PQ5NE16 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.03■□□□□ 0.8
CTSL3PQ5NE16 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.03■□□□□ 0.8
CTSL3PQ5NE16 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CTSL3PQ5NE16 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CTSL3PQ5NE16 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CTSL3PQ5NE16 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CTSL3PQ5NE16 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.02■□□□□ 0.8
CTSL3PQ5NE16 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.02■□□□□ 0.8
CTSL3PQ5NE16 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CTSL3PQ5NE16 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CTSL3PQ5NE16 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.02■□□□□ 0.8
CTSL3PQ5NE16 CROCCP5-201ENST00000436658 830 ntBASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms