Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 MYCNOS-205ENST00000641950 531 ntBASIC17.94■□□□□ 0.46
PCGF3Q3KNV8 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCGF3Q3KNV8 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.94■□□□□ 0.46
PCGF3Q3KNV8 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCGF3Q3KNV8 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCGF3Q3KNV8 AC003102.1-202ENST00000563394 1796 ntBASIC17.94■□□□□ 0.46
PCGF3Q3KNV8 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
PCGF3Q3KNV8 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCGF3Q3KNV8 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCGF3Q3KNV8 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCGF3Q3KNV8 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCGF3Q3KNV8 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCGF3Q3KNV8 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCGF3Q3KNV8 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
PCGF3Q3KNV8 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
PCGF3Q3KNV8 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
PCGF3Q3KNV8 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCGF3Q3KNV8 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCGF3Q3KNV8 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
PCGF3Q3KNV8 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCGF3Q3KNV8 AC011767.1-201ENST00000617410 1153 ntBASIC17.93■□□□□ 0.46
PCGF3Q3KNV8 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCGF3Q3KNV8 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCGF3Q3KNV8 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.93■□□□□ 0.46
PCGF3Q3KNV8 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCGF3Q3KNV8 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCGF3Q3KNV8 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCGF3Q3KNV8 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
PCGF3Q3KNV8 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.93■□□□□ 0.46
PCGF3Q3KNV8 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.93■□□□□ 0.46
PCGF3Q3KNV8 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.93■□□□□ 0.46
PCGF3Q3KNV8 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCGF3Q3KNV8 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCGF3Q3KNV8 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.92■□□□□ 0.46
PCGF3Q3KNV8 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCGF3Q3KNV8 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.92■□□□□ 0.46
PCGF3Q3KNV8 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
PCGF3Q3KNV8 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCGF3Q3KNV8 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.92■□□□□ 0.46
PCGF3Q3KNV8 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PCGF3Q3KNV8 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
PCGF3Q3KNV8 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.92■□□□□ 0.46
PCGF3Q3KNV8 AC090192.1-201ENST00000517740 490 ntBASIC17.92■□□□□ 0.46
PCGF3Q3KNV8 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.92■□□□□ 0.46
PCGF3Q3KNV8 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.92■□□□□ 0.46
PCGF3Q3KNV8 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PCGF3Q3KNV8 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.92■□□□□ 0.46
PCGF3Q3KNV8 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.92■□□□□ 0.46
PCGF3Q3KNV8 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCGF3Q3KNV8 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCGF3Q3KNV8 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
PCGF3Q3KNV8 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCGF3Q3KNV8 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCGF3Q3KNV8 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCGF3Q3KNV8 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCGF3Q3KNV8 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCGF3Q3KNV8 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCGF3Q3KNV8 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.91■□□□□ 0.46
PCGF3Q3KNV8 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.91■□□□□ 0.46
PCGF3Q3KNV8 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.91■□□□□ 0.46
PCGF3Q3KNV8 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.91■□□□□ 0.46
PCGF3Q3KNV8 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.91■□□□□ 0.46
PCGF3Q3KNV8 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.91■□□□□ 0.46
PCGF3Q3KNV8 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCGF3Q3KNV8 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PCGF3Q3KNV8 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCGF3Q3KNV8 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCGF3Q3KNV8 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCGF3Q3KNV8 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCGF3Q3KNV8 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.9■□□□□ 0.46
PCGF3Q3KNV8 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCGF3Q3KNV8 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
PCGF3Q3KNV8 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.9■□□□□ 0.46
PCGF3Q3KNV8 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.9■□□□□ 0.46
PCGF3Q3KNV8 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.9■□□□□ 0.46
PCGF3Q3KNV8 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCGF3Q3KNV8 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCGF3Q3KNV8 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCGF3Q3KNV8 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCGF3Q3KNV8 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.9■□□□□ 0.46
PCGF3Q3KNV8 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.9■□□□□ 0.46
PCGF3Q3KNV8 MFSD11-216ENST00000590393 1141 ntBASIC17.9■□□□□ 0.46
PCGF3Q3KNV8 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PCGF3Q3KNV8 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
PCGF3Q3KNV8 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCGF3Q3KNV8 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCGF3Q3KNV8 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCGF3Q3KNV8 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.9■□□□□ 0.46
PCGF3Q3KNV8 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCGF3Q3KNV8 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCGF3Q3KNV8 PLK5-205ENST00000642079 1969 ntBASIC17.9■□□□□ 0.46
PCGF3Q3KNV8 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCGF3Q3KNV8 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
PCGF3Q3KNV8 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
PCGF3Q3KNV8 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCGF3Q3KNV8 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCGF3Q3KNV8 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.89■□□□□ 0.45
PCGF3Q3KNV8 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.89■□□□□ 0.45
PCGF3Q3KNV8 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCGF3Q3KNV8 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms