Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC23.85■■□□□ 1.41
SHROOM1Q2M3G4 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
SHROOM1Q2M3G4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC23.85■■□□□ 1.41
SHROOM1Q2M3G4 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC23.85■■□□□ 1.41
SHROOM1Q2M3G4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
SHROOM1Q2M3G4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC23.85■■□□□ 1.41
SHROOM1Q2M3G4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC23.85■■□□□ 1.41
SHROOM1Q2M3G4 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
SHROOM1Q2M3G4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
SHROOM1Q2M3G4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC23.85■■□□□ 1.41
SHROOM1Q2M3G4 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SHROOM1Q2M3G4 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SHROOM1Q2M3G4 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
SHROOM1Q2M3G4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC23.84■■□□□ 1.41
SHROOM1Q2M3G4 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
SHROOM1Q2M3G4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC23.84■■□□□ 1.41
SHROOM1Q2M3G4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SHROOM1Q2M3G4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
SHROOM1Q2M3G4 AL049796.1-201ENST00000565336 1766 ntBASIC23.84■■□□□ 1.41
SHROOM1Q2M3G4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC23.84■■□□□ 1.41
SHROOM1Q2M3G4 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SHROOM1Q2M3G4 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SHROOM1Q2M3G4 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC23.84■■□□□ 1.41
SHROOM1Q2M3G4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
SHROOM1Q2M3G4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SHROOM1Q2M3G4 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
SHROOM1Q2M3G4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC23.84■■□□□ 1.41
SHROOM1Q2M3G4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC23.84■■□□□ 1.41
SHROOM1Q2M3G4 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC23.84■■□□□ 1.41
SHROOM1Q2M3G4 MIR4497-201ENST00000583208 89 ntBASIC23.84■■□□□ 1.41
SHROOM1Q2M3G4 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
SHROOM1Q2M3G4 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SHROOM1Q2M3G4 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC23.84■■□□□ 1.41
SHROOM1Q2M3G4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
SHROOM1Q2M3G4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC23.84■■□□□ 1.41
SHROOM1Q2M3G4 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SHROOM1Q2M3G4 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SHROOM1Q2M3G4 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC23.83■■□□□ 1.41
SHROOM1Q2M3G4 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC23.83■■□□□ 1.41
SHROOM1Q2M3G4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC23.83■■□□□ 1.41
SHROOM1Q2M3G4 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SHROOM1Q2M3G4 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
SHROOM1Q2M3G4 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
SHROOM1Q2M3G4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC23.83■■□□□ 1.41
SHROOM1Q2M3G4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
SHROOM1Q2M3G4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC23.83■■□□□ 1.41
SHROOM1Q2M3G4 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC23.83■■□□□ 1.41
SHROOM1Q2M3G4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
SHROOM1Q2M3G4 FEM1AP4-201ENST00000443167 1987 ntBASIC23.83■■□□□ 1.41
SHROOM1Q2M3G4 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
SHROOM1Q2M3G4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
SHROOM1Q2M3G4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
SHROOM1Q2M3G4 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
SHROOM1Q2M3G4 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC23.83■■□□□ 1.4
SHROOM1Q2M3G4 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
SHROOM1Q2M3G4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC23.83■■□□□ 1.4
SHROOM1Q2M3G4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SHROOM1Q2M3G4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
SHROOM1Q2M3G4 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC23.82■■□□□ 1.4
SHROOM1Q2M3G4 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC23.82■■□□□ 1.4
SHROOM1Q2M3G4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SHROOM1Q2M3G4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC23.82■■□□□ 1.4
SHROOM1Q2M3G4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SHROOM1Q2M3G4 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
SHROOM1Q2M3G4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC23.82■■□□□ 1.4
SHROOM1Q2M3G4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
SHROOM1Q2M3G4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SHROOM1Q2M3G4 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SHROOM1Q2M3G4 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
SHROOM1Q2M3G4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SHROOM1Q2M3G4 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC23.81■■□□□ 1.4
SHROOM1Q2M3G4 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SHROOM1Q2M3G4 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SHROOM1Q2M3G4 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
SHROOM1Q2M3G4 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC23.81■■□□□ 1.4
SHROOM1Q2M3G4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC23.81■■□□□ 1.4
SHROOM1Q2M3G4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
SHROOM1Q2M3G4 MIR2861-201ENST00000636310 90 ntBASIC23.81■■□□□ 1.4
SHROOM1Q2M3G4 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC23.81■■□□□ 1.4
SHROOM1Q2M3G4 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SHROOM1Q2M3G4 KRT8P36-201ENST00000489121 1440 ntBASIC23.81■■□□□ 1.4
SHROOM1Q2M3G4 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SHROOM1Q2M3G4 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SHROOM1Q2M3G4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
SHROOM1Q2M3G4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SHROOM1Q2M3G4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
SHROOM1Q2M3G4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC23.8■■□□□ 1.4
SHROOM1Q2M3G4 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SHROOM1Q2M3G4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SHROOM1Q2M3G4 BID-212ENST00000614949 1988 ntTSL 5 BASIC23.8■■□□□ 1.4
SHROOM1Q2M3G4 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SHROOM1Q2M3G4 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SHROOM1Q2M3G4 KRASP1-201ENST00000407852 552 ntBASIC23.8■■□□□ 1.4
SHROOM1Q2M3G4 TSPY7P-201ENST00000431358 1114 ntBASIC23.8■■□□□ 1.4
SHROOM1Q2M3G4 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC23.8■■□□□ 1.4
SHROOM1Q2M3G4 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC23.8■■□□□ 1.4
SHROOM1Q2M3G4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC23.8■■□□□ 1.4
SHROOM1Q2M3G4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC23.8■■□□□ 1.4
SHROOM1Q2M3G4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC23.8■■□□□ 1.4
SHROOM1Q2M3G4 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms