Protein–RNA interactions for Protein: Q06406

LSM6, U6 snRNA-associated Sm-like protein LSm6, yeastyeast

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM6Q06406 SMB1YER029C 591 nt0.38□□□□□ -2.35
LSM6Q06406 PRM8YGL053W 714 nt0.38□□□□□ -2.35
LSM6Q06406 YHL048C-AYHL048C-A 135 nt0.38□□□□□ -2.35
LSM6Q06406 ABM1YJR108W 372 nt0.38□□□□□ -2.35
LSM6Q06406 RCN1YKL159C 636 nt0.38□□□□□ -2.35
LSM6Q06406 YET2YMR040W 483 nt0.38□□□□□ -2.35
LSM6Q06406 YOL024WYOL024W 519 nt0.38□□□□□ -2.35
LSM6Q06406 YBR062CYBR062C 543 nt0.38□□□□□ -2.35
LSM6Q06406 SGO1YOR073W 1773 nt0.37□□□□□ -2.35
LSM6Q06406 MIC19YFR011C 513 nt0.37□□□□□ -2.35
LSM6Q06406 HYM1YKL189W 1200 nt0.37□□□□□ -2.35
LSM6Q06406 YLR031WYLR031W 561 nt0.37□□□□□ -2.35
LSM6Q06406 RPL9BYNL067W 576 nt0.37□□□□□ -2.35
LSM6Q06406 YNL235CYNL235C 432 nt0.37□□□□□ -2.35
LSM6Q06406 PIP2YOR363C 2991 nt0.37□□□□□ -2.35
LSM6Q06406 SWI6YLR182W 2412 nt0.37□□□□□ -2.35
LSM6Q06406 YER121WYER121W 345 nt0.36□□□□□ -2.35
LSM6Q06406 YKL115CYKL115C 393 nt0.36□□□□□ -2.35
LSM6Q06406 SEC22YLR268W 645 nt0.36□□□□□ -2.35
LSM6Q06406 YLR366WYLR366W 306 nt0.36□□□□□ -2.35
LSM6Q06406 YMR173W-AYMR173W-A 1185 nt0.36□□□□□ -2.35
LSM6Q06406 YBL108WYBL108W 306 nt0.36□□□□□ -2.35
LSM6Q06406 SHG1YBR258C 429 nt0.36□□□□□ -2.35
LSM6Q06406 YDR262WYDR262W 819 nt0.35□□□□□ -2.35
LSM6Q06406 RPL38YLR325C 237 nt0.35□□□□□ -2.35
LSM6Q06406 YOL019W-AYOL019W-A 153 nt0.35□□□□□ -2.35
LSM6Q06406 IZH4YOL101C 939 nt0.35□□□□□ -2.35
LSM6Q06406 IRC14YOR135C 342 nt0.35□□□□□ -2.35
LSM6Q06406 FMP23YBR047W 528 nt0.35□□□□□ -2.35
LSM6Q06406 GPX2YBR244W 489 nt0.35□□□□□ -2.35
LSM6Q06406 RKR1YMR247C 4689 nt0.34□□□□□ -2.35
LSM6Q06406 RIM20YOR275C 1986 nt0.34□□□□□ -2.35
LSM6Q06406 IST3YIR005W 447 nt0.34□□□□□ -2.36
LSM6Q06406 TOF2YKR010C 2316 nt0.34□□□□□ -2.36
LSM6Q06406 COX8YLR395C 237 nt0.34□□□□□ -2.36
LSM6Q06406 CGI121YML036W 546 nt0.34□□□□□ -2.36
LSM6Q06406 YBR032WYBR032W 303 nt0.34□□□□□ -2.36
LSM6Q06406 DPB11YJL090C 2295 nt0.34□□□□□ -2.36
LSM6Q06406 SLS1YLR139C 1932 nt0.33□□□□□ -2.36
LSM6Q06406 MXR1YER042W 555 nt0.33□□□□□ -2.36
LSM6Q06406 RFA3YJL173C 369 nt0.33□□□□□ -2.36
LSM6Q06406 DDR48YMR173W 1293 nt0.33□□□□□ -2.36
LSM6Q06406 RIO2YNL207W 1278 nt0.33□□□□□ -2.36
LSM6Q06406 YPL034WYPL034W 498 nt0.33□□□□□ -2.36
LSM6Q06406 RTC6YPL183W-A 282 nt0.33□□□□□ -2.36
LSM6Q06406 YBR090CYBR090C 369 nt0.33□□□□□ -2.36
LSM6Q06406 YBR224WYBR224W 516 nt0.33□□□□□ -2.36
LSM6Q06406 BRO1YPL084W 2535 nt0.32□□□□□ -2.36
LSM6Q06406 SHE4YOR035C 2370 nt0.32□□□□□ -2.36
LSM6Q06406 snR83snR83 306 nt0.32□□□□□ -2.36
LSM6Q06406 RUF20RUF20 443 nt0.32□□□□□ -2.36
LSM6Q06406 SWF1YDR126W 1011 nt0.31□□□□□ -2.36
LSM6Q06406 SVP26YHR181W 687 nt0.31□□□□□ -2.36
LSM6Q06406 LST4YKL176C 2487 nt0.31□□□□□ -2.36
LSM6Q06406 YLL007CYLL007C 1998 nt0.3□□□□□ -2.36
LSM6Q06406 YDL009CYDL009C 324 nt0.3□□□□□ -2.36
LSM6Q06406 KEG1YFR042W 603 nt0.3□□□□□ -2.36
LSM6Q06406 YIL030W-AYIL030W-A 339 nt0.3□□□□□ -2.36
LSM6Q06406 BMT5YIL096C 1011 nt0.3□□□□□ -2.36
LSM6Q06406 YKL183C-AYKL183C-A 213 nt0.3□□□□□ -2.36
LSM6Q06406 YBR051WYBR051W 351 nt0.3□□□□□ -2.36
LSM6Q06406 YDL206WYDL206W 2289 nt0.29□□□□□ -2.36
LSM6Q06406 YDR194W-AYDR194W-A 153 nt0.29□□□□□ -2.36
LSM6Q06406 PAU2YEL049W 363 nt0.29□□□□□ -2.36
LSM6Q06406 CAJ1YER048C 1176 nt0.29□□□□□ -2.36
LSM6Q06406 SMD2YLR275W 333 nt0.29□□□□□ -2.36
LSM6Q06406 YJR098CYJR098C 1971 nt0.28□□□□□ -2.36
LSM6Q06406 YDL073WYDL073W 2955 nt0.28□□□□□ -2.36
LSM6Q06406 YDL196WYDL196W 330 nt0.28□□□□□ -2.36
LSM6Q06406 ECM12YHR021W-A 456 nt0.28□□□□□ -2.36
LSM6Q06406 YLR042CYLR042C 486 nt0.28□□□□□ -2.36
LSM6Q06406 RPS10BYMR230W 318 nt0.28□□□□□ -2.36
LSM6Q06406 PEP3YLR148W 2757 nt0.28□□□□□ -2.37
LSM6Q06406 YER147C-AYER147C-A 411 nt0.27□□□□□ -2.37
LSM6Q06406 YGR265WYGR265W 411 nt0.27□□□□□ -2.37
LSM6Q06406 YIL059CYIL059C 366 nt0.27□□□□□ -2.37
LSM6Q06406 SMD3YLR147C 306 nt0.27□□□□□ -2.37
LSM6Q06406 YBR221W-AYBR221W-A 105 nt0.27□□□□□ -2.37
LSM6Q06406 LTE1YAL024C 4308 nt0.27□□□□□ -2.37
LSM6Q06406 MMS21YEL019C 804 nt0.26□□□□□ -2.37
LSM6Q06406 YGL109WYGL109W 324 nt0.26□□□□□ -2.37
LSM6Q06406 POP6YGR030C 477 nt0.26□□□□□ -2.37
LSM6Q06406 RNR4YGR180C 1038 nt0.26□□□□□ -2.37
LSM6Q06406 YJL156W-AYJL156W-A 222 nt0.26□□□□□ -2.37
LSM6Q06406 CLU1YMR012W 3834 nt0.26□□□□□ -2.37
LSM6Q06406 PHO80YOL001W 882 nt0.26□□□□□ -2.37
LSM6Q06406 PEX34YCL056C 435 nt0.26□□□□□ -2.37
LSM6Q06406 LYS14YDR034C 2373 nt0.25□□□□□ -2.37
LSM6Q06406 PIG1YLR273C 1947 nt0.25□□□□□ -2.37
LSM6Q06406 PAC1YOR269W 1485 nt0.25□□□□□ -2.37
LSM6Q06406 GEP7YGL057C 864 nt0.25□□□□□ -2.37
LSM6Q06406 YGR242WYGR242W 309 nt0.25□□□□□ -2.37
LSM6Q06406 TMA22YJR014W 597 nt0.25□□□□□ -2.37
LSM6Q06406 BLS1YLR408C 369 nt0.25□□□□□ -2.37
LSM6Q06406 YOR105WYOR105W 327 nt0.25□□□□□ -2.37
LSM6Q06406 YBR012CYBR012C 420 nt0.25□□□□□ -2.37
LSM6Q06406 ROX1YPR065W 1107 nt0.25□□□□□ -2.37
LSM6Q06406 YCL046WYCL046W 324 nt0.25□□□□□ -2.37
LSM6Q06406 MPT5YGL178W 2580 nt0.25□□□□□ -2.37
LSM6Q06406 RAD6YGL058W 519 nt0.24□□□□□ -2.37
Retrieved 100 of 7,029 protein–RNA pairs in 44 ms