Protein–RNA interactions for Protein: Q06263

VTA1, Vacuolar protein sorting-associated protein VTA1, yeastyeast

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTA1Q06263 SPP41YDR464W 4308 nt2.08□□□□□ -2.08
VTA1Q06263 GCN2YDR283C 4980 nt2.08□□□□□ -2.08
VTA1Q06263 CHC1YGL206C 4962 nt2.08□□□□□ -2.08
VTA1Q06263 HUR1YGL168W 333 nt2.08□□□□□ -2.08
VTA1Q06263 ECL1YGR146C 636 nt2.08□□□□□ -2.08
VTA1Q06263 snR13snR13 124 nt2.08□□□□□ -2.08
VTA1Q06263 STB4YMR019W 2850 nt2.08□□□□□ -2.08
VTA1Q06263 YMR045CYMR045C 5268 nt2.08□□□□□ -2.08
VTA1Q06263 CDC24YAL041W 2565 nt2.07□□□□□ -2.08
VTA1Q06263 NOP14YDL148C 2433 nt2.07□□□□□ -2.08
VTA1Q06263 BRP1YGL007W 378 nt2.07□□□□□ -2.08
VTA1Q06263 NBL1YHR199C-A 222 nt2.07□□□□□ -2.08
VTA1Q06263 YOR394C-AYOR394C-A 168 nt2.07□□□□□ -2.08
VTA1Q06263 snR54snR54 86 nt2.07□□□□□ -2.08
VTA1Q06263 RTT107YHR154W 3213 nt2.06□□□□□ -2.08
VTA1Q06263 ATP17YDR377W 306 nt2.06□□□□□ -2.08
VTA1Q06263 YER121WYER121W 345 nt2.06□□□□□ -2.08
VTA1Q06263 YGL069CYGL069C 465 nt2.06□□□□□ -2.08
VTA1Q06263 YHR139C-AYHR139C-A 312 nt2.06□□□□□ -2.08
VTA1Q06263 UBP2YOR124C 3819 nt2.06□□□□□ -2.08
VTA1Q06263 EGD1YPL037C 474 nt2.06□□□□□ -2.08
VTA1Q06263 MGM1YOR211C 2646 nt2.06□□□□□ -2.08
VTA1Q06263 IST2YBR086C 2841 nt2.06□□□□□ -2.08
VTA1Q06263 CDC27YBL084C 2277 nt2.06□□□□□ -2.08
VTA1Q06263 VPS8YAL002W 3825 nt2.05□□□□□ -2.08
VTA1Q06263 HSK3YKL138C-A 210 nt2.05□□□□□ -2.08
VTA1Q06263 YKR075W-AYKR075W-A 270 nt2.05□□□□□ -2.08
VTA1Q06263 YLR053CYLR053C 327 nt2.05□□□□□ -2.08
VTA1Q06263 DGR1YNL130C-A 147 nt2.05□□□□□ -2.08
VTA1Q06263 YPL205CYPL205C 345 nt2.05□□□□□ -2.08
VTA1Q06263 RIC1YLR039C 3171 nt2.05□□□□□ -2.08
VTA1Q06263 COX1Q0045 1605 nt2.05□□□□□ -2.08
VTA1Q06263 RTT101YJL047C 2529 nt2.05□□□□□ -2.08
VTA1Q06263 SGD1YLR336C 2700 nt2.04□□□□□ -2.08
VTA1Q06263 REV3YPL167C 4515 nt2.04□□□□□ -2.08
VTA1Q06263 EMP24YGL200C 612 nt2.04□□□□□ -2.08
VTA1Q06263 YJR157WYJR157W 363 nt2.04□□□□□ -2.08
VTA1Q06263 GPX2YBR244W 489 nt2.04□□□□□ -2.08
VTA1Q06263 YHR214C-BYHR214C-B 5382 nt2.03□□□□□ -2.08
VTA1Q06263 YEL057CYEL057C 702 nt2.03□□□□□ -2.08
VTA1Q06263 YLR101CYLR101C 396 nt2.03□□□□□ -2.08
VTA1Q06263 CMC2YBL059C-A 330 nt2.03□□□□□ -2.08
VTA1Q06263 CDC33YOL139C 642 nt2.03□□□□□ -2.08
VTA1Q06263 MSS11YMR164C 2277 nt2.03□□□□□ -2.08
VTA1Q06263 FKS1YLR342W 5631 nt2.03□□□□□ -2.09
VTA1Q06263 NOT5YPR072W 1683 nt2.02□□□□□ -2.09
VTA1Q06263 GYP5YPL249C 2685 nt2.02□□□□□ -2.09
VTA1Q06263 LYS9YNR050C 1341 nt2.02□□□□□ -2.09
VTA1Q06263 CDC60YPL160W 3273 nt2.02□□□□□ -2.09
VTA1Q06263 YER135CYER135C 393 nt2.02□□□□□ -2.09
VTA1Q06263 RPS18BYML026C 441 nt2.02□□□□□ -2.09
VTA1Q06263 SSQ1YLR369W 1974 nt2.01□□□□□ -2.09
VTA1Q06263 YDR341CYDR341C 1824 nt2.01□□□□□ -2.09
VTA1Q06263 YDL062WYDL062W 426 nt2.01□□□□□ -2.09
VTA1Q06263 RPL37BYDR500C 267 nt2.01□□□□□ -2.09
VTA1Q06263 IES5YER092W 378 nt2.01□□□□□ -2.09
VTA1Q06263 RRF1YHR038W 693 nt2.01□□□□□ -2.09
VTA1Q06263 YHR052W-AYHR052W-A 195 nt2.01□□□□□ -2.09
VTA1Q06263 YHR054W-AYHR054W-A 195 nt2.01□□□□□ -2.09
VTA1Q06263 RUF22RUF22 515 nt2.01□□□□□ -2.09
VTA1Q06263 MF(ALPHA)1YPL187W 498 nt2.01□□□□□ -2.09
VTA1Q06263 YPR146CYPR146C 330 nt2.01□□□□□ -2.09
VTA1Q06263 SCH9YHR205W 2475 nt2.01□□□□□ -2.09
VTA1Q06263 UFD4YKL010C 4452 nt2.01□□□□□ -2.09
VTA1Q06263 YLR149CYLR149C 2193 nt2□□□□□ -2.09
VTA1Q06263 YGL024WYGL024W 336 nt2□□□□□ -2.09
VTA1Q06263 FCF2YLR051C 654 nt2□□□□□ -2.09
VTA1Q06263 YMR153C-AYMR153C-A 336 nt2□□□□□ -2.09
VTA1Q06263 YBR224WYBR224W 516 nt2□□□□□ -2.09
VTA1Q06263 YCL023CYCL023C 348 nt2□□□□□ -2.09
VTA1Q06263 SET2YJL168C 2202 nt2□□□□□ -2.09
VTA1Q06263 SYH1YPL105C 2550 nt2□□□□□ -2.09
VTA1Q06263 UBP1YDL122W 2430 nt1.99□□□□□ -2.09
VTA1Q06263 ELG1YOR144C 2376 nt1.99□□□□□ -2.09
VTA1Q06263 YSW1YBR148W 1830 nt1.99□□□□□ -2.09
VTA1Q06263 YER006C-AYER006C-A 318 nt1.99□□□□□ -2.09
VTA1Q06263 YER172C-AYER172C-A 381 nt1.99□□□□□ -2.09
VTA1Q06263 YHR071C-AYHR071C-A 321 nt1.99□□□□□ -2.09
VTA1Q06263 TMA22YJR014W 597 nt1.99□□□□□ -2.09
VTA1Q06263 YLR222C-AYLR222C-A 231 nt1.99□□□□□ -2.09
VTA1Q06263 TIF11YMR260C 462 nt1.99□□□□□ -2.09
VTA1Q06263 YOR343W-BYOR343W-B 5313 nt1.99□□□□□ -2.09
VTA1Q06263 UBR2YLR024C 5619 nt1.98□□□□□ -2.09
VTA1Q06263 GDS1YOR355W 1569 nt1.98□□□□□ -2.09
VTA1Q06263 QCR7YDR529C 384 nt1.98□□□□□ -2.09
VTA1Q06263 CRG1YHR209W 876 nt1.98□□□□□ -2.09
VTA1Q06263 NFU1YKL040C 771 nt1.98□□□□□ -2.09
VTA1Q06263 YBL012CYBL012C 402 nt1.98□□□□□ -2.09
VTA1Q06263 YBR032WYBR032W 303 nt1.98□□□□□ -2.09
VTA1Q06263 RBK1YCR036W 1002 nt1.97□□□□□ -2.09
VTA1Q06263 YDR509WYDR509W 348 nt1.97□□□□□ -2.09
VTA1Q06263 VAR1Q0140 1197 nt1.97□□□□□ -2.09
VTA1Q06263 YML084WYML084W 309 nt1.97□□□□□ -2.09
VTA1Q06263 YBL083CYBL083C 426 nt1.97□□□□□ -2.09
VTA1Q06263 YBR121C-AYBR121C-A 159 nt1.97□□□□□ -2.09
VTA1Q06263 YFR016CYFR016C 3702 nt1.97□□□□□ -2.09
VTA1Q06263 RGA1YOR127W 3024 nt1.96□□□□□ -2.1
VTA1Q06263 PLC1YPL268W 2610 nt1.96□□□□□ -2.1
VTA1Q06263 YER023C-AYER023C-A 213 nt1.96□□□□□ -2.1
VTA1Q06263 ZEO1YOL109W 342 nt1.96□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 12.3 ms